Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.4e-106 389.8 217 100.0
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 1.6e-70 270.0 216 69.9
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.8e-67 259.2 199 77.9
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 4.1e-63 245.4 215 65.1
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 4.3e-60 235.3 214 63.1
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 8.9e-58 227.6 200 64.5
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 4.9e-56 221.9 210 61.9
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 6.4e-56 221.5 211 60.7
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 3.2e-55 219.2 201 62.2
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 3.3e-52 209.1 206 56.8
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 5.6e-52 208.4 208 59.1
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 7.3e-52 208.0 214 57.0
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 4.8e-51 205.3 203 57.1
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 6.2e-51 204.9 203 57.6
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.4e-50 203.8 211 56.4
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 5.3e-50 201.8 226 54.9
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 9.0e-50 201.1 207 56.5
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 2.0e-49 199.9 210 58.1
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 5.8e-49 198.4 202 56.4
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 7.6e-49 198.0 213 56.3
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 6.4e-48 194.9 218 55.0
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 6.4e-48 194.9 209 54.1
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 1.9e-47 193.4 229 51.1
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 2.4e-47 193.0 209 53.6
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 5.4e-47 191.8 203 56.2
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 7.1e-47 191.4 210 55.7
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 9.3e-47 191.0 232 51.7
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 2.7e-46 189.5 201 55.2
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 1.8e-45 186.8 208 51.9
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 2.3e-45 186.4 209 52.6
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 3.0e-45 186.0 202 55.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.3e-43 180.6 208 51.0
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 2.1e-43 179.9 211 52.6
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 2.8e-43 179.5 202 54.5
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 2.8e-43 179.5 197 56.3
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 6.2e-43 178.3 197 54.3
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 3.1e-42 176.0 209 49.3
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.9e-42 174.9 214 50.0
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 6.9e-42 174.9 214 50.0
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 1.5e-41 173.7 201 53.7
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 2.6e-41 172.9 210 51.9
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 3.4e-41 172.6 208 50.0
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.4e-39 167.2 161 57.1
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 4.2e-39 165.6 161 56.5
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.1e-38 163.3 219 48.9
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 4.6e-38 162.2 160 56.2
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 4.6e-38 162.2 218 48.6
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 1.0e-37 161.0 160 54.4
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.3e-37 160.6 210 51.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 2.3e-37 159.8 161 55.9
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 3.0e-37 159.5 201 49.3
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 8.7e-37 157.9 161 54.0
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.5e-36 157.1 161 54.0
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 3.3e-36 156.0 201 48.8
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 3.3e-36 156.0 144 62.5
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 1.6e-35 153.7 161 52.8
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.1e-35 153.3 189 50.3
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 9.0e-34 147.9 161 48.4
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.5e-33 147.1 178 52.8
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.5e-33 147.1 209 44.5
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 4.5e-33 145.6 207 45.9
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 1.1e-31 141.0 189 45.5
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 2.5e-31 139.8 207 44.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 7.1e-31 138.3 147 55.8
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 4.6e-30 135.6 201 44.8
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.5e-28 130.6 144 53.5
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.3e-27 127.5 144 56.2
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 8.2e-27 124.8 152 50.0
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 8.2e-27 124.8 113 57.5
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.1e-26 124.4 136 49.3
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 9.0e-26 121.3 135 48.1
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 5.9e-25 118.6 155 52.3
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.3e-24 117.5 108 57.4
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.3e-24 117.5 153 49.0
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.9e-23 113.6 201 40.8
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 5.5e-23 112.1 201 40.3
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 9.3e-23 111.3 201 40.3
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 3.0e-21 106.3 120 50.8
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 6.7e-21 105.1 99 60.6
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 6.7e-21 105.1 107 57.9
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 5.7e-20 102.1 151 47.0
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 4.8e-19 99.0 119 52.1
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-18 97.8 165 43.0
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.1e-18 96.3 144 43.8
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 5.3e-18 95.5 144 44.4
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 7.7e-17 91.7 131 42.0
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 7.7e-17 91.7 198 35.9
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.2e-14 84.3 134 43.3
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.4e-13 80.9 89 53.9
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 2.3e-13 80.1 131 36.6
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.8e-11 73.2 105 43.8
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.9e-10 68.6 84 47.6
Gorai.010G163100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.5e-09 67.4 203 31.0
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 3.4e-09 66.2 121 38.0
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 1.0e-08 64.7 67 50.7
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 1.0e-08 64.7 99 44.4
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 8.5e-08 61.6 74 39.2
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 8.5e-08 61.6 74 48.6
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 9.4e-07 58.2 110 35.5
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 4.7e-06 55.8 144 28.5
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 6.1e-06 55.5 114 33.3


User provided reference genes

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