Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.6e-62 242.7 131 100.0
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 4.6e-57 224.6 131 90.8
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 7.8e-57 223.8 131 91.6
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 1.0e-56 223.4 131 91.6
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.7e-56 222.6 131 91.6
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 2.3e-56 222.2 129 92.2
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.9e-56 221.5 131 90.8
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 3.9e-56 221.5 131 91.6
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 3.9e-56 221.5 131 90.1
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 8.6e-56 220.3 131 90.1
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 90.8
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.5e-55 219.5 131 88.5
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 3.3e-55 218.4 127 91.3
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.6e-55 217.6 129 90.7
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.6e-55 217.6 129 90.7
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 87.8
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.2e-54 216.5 131 88.5
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 2.1e-54 215.7 129 89.1
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 2.1e-54 215.7 131 87.0
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 2.8e-54 215.3 127 89.8
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.8e-54 215.3 129 90.7
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 86.3
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 4.7e-54 214.5 127 89.8
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 4.7e-54 214.5 129 89.9
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 89.1
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 6.2e-54 214.2 131 86.3
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 86.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 8.1e-54 213.8 131 87.8
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.1e-53 213.4 127 89.8
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 1.4e-53 213.0 131 87.0
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.4e-53 213.0 131 85.5
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.8e-53 212.6 127 89.8
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.8e-53 212.6 130 90.0
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.8e-53 212.6 129 88.4
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 86.3
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 87.0
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 86.8
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 88.4
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 87.6
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 4.0e-53 211.5 131 87.0
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 87.6
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 84.7
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 86.3
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 6.8e-53 210.7 129 86.8
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 87.0
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.9e-53 210.3 129 87.6
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 8.9e-53 210.3 140 83.6
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.5e-52 209.5 131 84.7
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.5e-52 209.5 127 87.4
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 1.5e-52 209.5 129 86.8
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 2.0e-52 209.1 129 86.8
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.6e-52 208.8 129 86.8
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 2.6e-52 208.8 129 86.0
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.4e-52 208.4 129 88.4
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 3.4e-52 208.4 131 85.5
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 4.4e-52 208.0 131 83.2
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 5.8e-52 207.6 126 87.3
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 9.9e-52 206.8 129 84.5
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 9.9e-52 206.8 129 88.4
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 84.7
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.2e-51 205.7 129 86.8
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 2.2e-51 205.7 125 87.2
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 2.9e-51 205.3 131 84.0
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 3.7e-51 204.9 129 82.9
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.4e-50 203.0 136 81.6
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 83.2
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 79.4
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 9.2e-50 200.3 131 80.9
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 9.2e-50 200.3 131 80.9
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 9.2e-50 200.3 131 80.9
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 2.7e-49 198.7 129 81.4
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 2.7e-49 198.7 129 81.4
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 81.7
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 3.5e-49 198.4 131 80.2
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 3.5e-49 198.4 131 80.2
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.6e-49 198.0 129 79.8
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 6.0e-49 197.6 122 86.9
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 7.8e-49 197.2 129 79.8
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 7.8e-49 197.2 113 92.0
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 6.6e-48 194.1 114 89.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.9e-47 192.6 144 75.7
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 7.3e-47 190.7 186 62.4
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.2e-46 189.9 129 79.8
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.1e-46 189.1 120 86.7
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 8.1e-46 187.2 114 85.1
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 8.1e-46 187.2 121 79.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 8.1e-46 187.2 129 76.7
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.8e-45 186.0 120 85.0
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 3.1e-45 185.3 110 90.0
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 8.9e-45 183.7 133 77.4
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 8.9e-45 183.7 111 85.6
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 8.9e-45 183.7 106 91.5
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.6e-44 182.2 113 85.0
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 2.2e-43 179.1 117 82.1
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 2.2e-43 179.1 111 83.8
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 3.8e-43 178.3 105 91.4
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 3.8e-43 178.3 108 86.1
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 6.4e-43 177.6 123 80.5
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.4e-42 176.4 104 91.3
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.9e-42 176.0 129 76.7
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.9e-42 176.0 107 85.0
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 9.3e-42 173.7 113 79.6
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 7.8e-41 170.6 105 86.7
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.0e-40 170.2 105 84.8
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.3e-40 169.1 131 72.5
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 6.6e-40 167.5 108 80.6
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 8.7e-40 167.2 128 71.9
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 1.5e-39 166.4 121 74.4
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 5.6e-39 164.5 92 93.5
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 2.1e-38 162.5 131 64.1
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 2.8e-38 162.2 92 91.3
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 2.8e-38 162.2 125 64.8
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 2.8e-38 162.2 92 91.3
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 6.2e-38 161.0 126 67.5
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.1e-37 160.2 133 68.4
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.1e-37 160.2 159 59.7
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 4.0e-37 158.3 92 91.3
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 9.0e-37 157.1 121 70.2
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 2.6e-36 155.6 92 85.9
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 4.4e-36 154.8 87 92.0
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 5.8e-36 154.5 89 88.8
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 1.3e-35 153.3 87 92.0
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 6.4e-35 151.0 110 67.3
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 1.1e-34 150.2 122 70.5
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.9e-34 149.4 131 68.7
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 2.4e-34 149.1 92 83.7
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 4.2e-34 148.3 95 81.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.6e-33 146.4 84 88.1
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 1.7e-32 142.9 88 87.5
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.3e-32 142.5 87 88.5
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 2.5e-31 139.0 90 81.1
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 7.4e-31 137.5 102 76.5
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 9.6e-31 137.1 95 81.1
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.4e-26 122.5 71 88.7
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.2e-26 122.1 92 73.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 9.3e-26 120.6 92 72.8
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 2.1e-25 119.4 202 44.6
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.0e-24 115.5 88 72.7
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 2.5e-23 112.5 111 62.2
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 5.6e-23 111.3 63 90.5
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 4.0e-21 105.1 61 88.5
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.2e-20 103.6 125 45.6
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.7e-19 99.8 67 73.1
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 2.2e-19 99.4 64 76.6
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 4.9e-19 98.2 66 74.2
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 6.5e-19 97.8 64 75.0
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 8.4e-19 97.4 121 42.1
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 1.9e-18 96.3 88 60.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 7.1e-18 94.4 65 73.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 7.9e-17 90.9 65 70.8
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 2.1e-14 82.8 114 42.1
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 1.1e-13 80.5 173 38.7
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.9e-11 72.4 120 34.2
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 2.7e-09 65.9 124 35.5
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 3.0e-08 62.4 47 70.2


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