Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G124301 Populus trichocarpa HOM05D005710 ORTHO05D004657 6.4e-66 253.8 120 100.0
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 1.3e-21 106.7 71 73.2
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 5.7e-14 81.3 80 52.5
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 1.7e-13 79.7 83 48.2
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 3.7e-13 78.6 76 51.3
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 6.3e-13 77.8 62 56.5
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 2.4e-12 75.9 72 55.6
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 3.1e-12 75.5 83 47.0
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 4.1e-12 75.1 91 45.1
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 5.4e-12 74.7 91 42.9
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.0e-12 74.3 77 50.6
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 1.2e-11 73.6 90 46.7
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 2.7e-11 72.4 82 47.6
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 5.9e-11 71.2 80 48.8
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 7.7e-11 70.9 99 42.4
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 7.7e-11 70.9 69 47.8
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 2.3e-10 69.3 83 47.0
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 2.9e-10 68.9 59 50.8
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 2.9e-10 68.9 82 46.3
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 3.8e-10 68.6 61 52.5
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 5.0e-10 68.2 56 55.4
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 8.6e-10 67.4 76 43.4
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 8.6e-10 67.4 58 51.7
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.5e-09 66.6 59 49.2
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.9e-09 66.2 63 52.4
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 2.5e-09 65.9 105 38.1
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 3.3e-09 65.5 76 43.4
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 5.5e-09 64.7 53 54.7
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 9.5e-09 63.9 60 48.3
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.6e-08 63.2 59 47.5
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 2.1e-08 62.8 62 50.0
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 3.6e-08 62.0 60 48.3
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 3.6e-08 62.0 60 48.3
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.7e-08 61.6 60 51.7
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 4.7e-08 61.6 55 49.1
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 6.1e-08 61.2 59 52.5
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 1.8e-07 59.7 54 50.0
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 3.0e-07 58.9 58 44.8
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 3.0e-07 58.9 82 43.9
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 3.0e-07 58.9 44 54.5
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 4.0e-07 58.5 49 49.0
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 4.0e-07 58.5 62 46.8
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 6.8e-07 57.8 52 51.9
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 6.8e-07 57.8 60 48.3
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 2.0e-06 56.2 61 49.2
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 3.4e-06 55.5 52 50.0
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 4.4e-06 55.1 73 35.6
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 4.4e-06 55.1 41 58.5
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 4.4e-06 55.1 63 44.4
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 7.5e-06 54.3 84 41.7


User provided reference genes

Program Settings