Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 6.1e-230 800.4 399 100.0
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 3.4e-212 741.5 399 93.5
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 7.6e-180 634.0 409 79.7
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.5e-170 602.4 402 77.9
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.5e-169 598.6 402 78.1
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 3.4e-164 582.0 398 74.4
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 2.1e-161 572.8 409 70.7
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.8e-160 569.7 394 73.9
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.8e-160 569.7 409 70.9
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.3e-158 563.5 371 77.1
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 4.8e-158 561.6 416 68.8
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 6.3e-158 561.2 396 72.2
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 3.1e-157 558.9 399 72.9
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.3e-157 558.1 410 69.5
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 5.3e-157 558.1 360 74.7
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 6.9e-157 557.8 363 74.7
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 3.4e-156 555.4 406 70.2
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 5.9e-156 554.7 403 71.0
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 1.3e-155 553.5 394 71.3
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.3e-155 553.5 394 71.3
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 6.5e-155 551.2 402 69.4
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 6.5e-155 551.2 393 70.2
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.1e-154 550.4 396 70.2
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 2.5e-154 549.3 408 69.6
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 2.7e-153 545.8 401 69.6
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.6e-153 545.4 401 69.6
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.6e-153 545.4 391 71.1
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 4.7e-153 545.0 349 76.8
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.0e-152 543.9 404 69.6
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.1e-151 540.4 359 73.0
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.1e-151 540.4 394 70.6
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.6e-151 539.3 385 70.9
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.3e-151 538.9 340 75.6
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.3e-150 537.0 360 72.8
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 3.7e-150 535.4 370 71.6
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.7e-150 535.4 401 68.3
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 3.7e-150 535.4 340 74.7
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.1e-149 533.9 408 68.9
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 2.4e-149 532.7 405 67.9
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 9.1e-149 530.8 440 64.1
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 1.2e-148 530.4 408 66.2
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.5e-148 530.0 401 68.1
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 2.0e-148 529.6 410 65.6
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.5e-148 528.9 407 66.8
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 3.5e-148 528.9 411 65.9
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.5e-148 528.5 370 69.5
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.3e-147 526.9 403 68.2
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 1.3e-147 526.9 371 69.5
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.7e-147 526.6 403 66.5
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 2.2e-147 526.2 370 69.2
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 3.8e-147 525.4 376 70.2
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 6.5e-147 524.6 386 69.2
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 8.5e-147 524.2 390 68.2
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 4.2e-146 521.9 396 66.7
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 5.5e-146 521.5 395 68.4
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 7.2e-146 521.2 400 68.0
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 9.4e-146 520.8 309 80.9
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 2.1e-145 519.6 391 67.0
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 2.1e-145 519.6 366 68.9
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 3.6e-145 518.8 390 68.5
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 3.6e-145 518.8 371 67.9
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 6.1e-145 518.1 341 74.8
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 8.0e-145 517.7 371 67.1
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.0e-144 517.3 393 67.2
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 2.3e-144 516.2 349 72.8
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 2.3e-144 516.2 340 74.4
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.5e-143 513.5 370 67.8
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 3.3e-143 512.3 374 68.2
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 1.3e-142 510.4 373 67.8
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 1.3e-142 510.4 373 67.8
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 2.2e-142 509.6 422 64.2
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.8e-142 509.2 394 65.0
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.8e-141 506.5 374 67.1
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 2.4e-141 506.1 390 65.1
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.2e-140 503.8 321 78.2
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.6e-140 503.4 391 66.5
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.6e-140 503.4 391 66.5
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 2.0e-140 503.1 391 66.8
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 2.0e-140 503.1 385 67.5
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 2.6e-140 502.7 421 62.5
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 4.5e-140 501.9 375 66.7
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.7e-139 500.0 358 69.0
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 2.2e-139 499.6 345 69.3
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 3.6e-137 492.3 415 62.7
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 4.0e-136 488.8 375 65.3
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 5.2e-136 488.4 318 73.0
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 6.8e-136 488.0 345 70.4
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 2.0e-135 486.5 369 67.5
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 1.2e-132 477.2 391 63.4
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 7.7e-132 474.6 370 62.7
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 2.3e-128 463.0 296 74.3
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 9.1e-125 451.1 373 63.0
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 1.7e-123 446.8 363 63.1
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.1e-122 444.1 373 62.5
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.5e-122 443.7 350 62.9
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.5e-114 417.2 248 79.4
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.2e-113 414.1 257 75.9
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 2.3e-112 409.8 293 73.7
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 4.1e-109 399.1 256 73.4
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 5.6e-106 388.7 341 62.2
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 4.7e-105 385.6 344 55.8
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 8.3e-102 374.8 277 71.5
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 1.8e-96 357.1 406 50.5
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 6.8e-96 355.1 303 64.4
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 6.0e-92 342.0 208 77.4
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 2.9e-86 323.2 360 45.6
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 1.3e-83 314.3 367 42.5
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.0e-67 261.5 181 69.1
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 1.1e-66 258.1 344 38.1
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 1.5e-42 177.9 124 63.7
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.3e-42 176.8 159 57.2
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 3.4e-39 166.8 101 77.2
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 3.8e-38 163.3 158 55.1
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 5.5e-37 159.5 93 78.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 3.0e-35 153.7 209 38.8
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.6e-28 130.2 113 61.1
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 2.3e-19 100.9 88 56.8
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 5.4e-16 89.7 51 74.5
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 1.5e-13 81.6 95 47.4


User provided reference genes

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