Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G112600 Populus trichocarpa HOM05D011223 ORTHO05D010778 2.6e-130 468.8 246 100.0
Sabra04G0072200 Salix brachista HOM05D011223 ORTHO05D010778 4.7e-79 298.5 242 71.1
Potri.017G102200 Populus trichocarpa HOM05D011223 ORTHO05D010778 7.3e-64 248.1 229 67.7
Sabra17G0088100 Salix brachista HOM05D011223 ORTHO05D010778 2.3e-49 199.9 228 60.5
Manes.01G104500 Manihot esculenta HOM05D011223 ORTHO05D010778 2.4e-27 126.7 234 41.5
QL02p065009 Quercus lobata HOM05D012028 ORTHO05D010778 9.0e-22 108.2 224 43.3
Cfa007707 Carpinus fangiana HOM05D012028 ORTHO05D010778 2.0e-21 107.1 247 38.5
Manes.02G060950 Manihot esculenta HOM05D011223 ORTHO05D010778 1.6e-18 97.4 219 42.0
Thecc.04G108700 Theobroma cacao HOM05D013808 ORTHO05D010778 1.3e-17 94.4 274 34.7
Dinv33878 Davidia involucrata HOM05D011223 ORTHO05D010778 6.7e-17 92.0 224 37.9
Prupe.3G247600 Prunus persica HOM05D012028 ORTHO05D010778 1.6e-15 87.4 219 39.7
Actinidia18091 Actinidia chinensis HOM05D011223 ORTHO05D010778 9.0e-14 81.6 235 36.2
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 1.9e-11 73.9 191 34.6
MD09G1076500 Malus domestica HOM05D012028 ORTHO05D010778 5.5e-11 72.4 253 32.4
CiPaw.04G051300 Carya illinoinensis HOM05D011223 ORTHO05D010778 1.6e-10 70.9 247 33.6
FAN09G1346 Fragaria x ananassa HOM05D012028 ORTHO05D010778 1.5e-08 64.3 220 30.9
Glyma.18G275800 Glycine max HOM05D017176 ORTHO05D014443 3.3e-08 63.2 179 36.9
FvH4_6g46170 Fragaria vesca HOM05D012028 ORTHO05D010778 4.3e-08 62.8 220 30.5
Sabra17G0087900 Salix brachista HOM05D000878 ORTHO05D004971 4.3e-08 62.8 74 55.4
FAN05G4491 Fragaria x ananassa HOM05D012028 ORTHO05D010778 7.4e-08 62.0 220 30.5
Thecc.03G110400 Theobroma cacao HOM05D051152 ORTHO05D025136 7.4e-08 62.0 230 30.0
Dinv36819 Davidia involucrata HOM05D011223 ORTHO05D016556 1.6e-07 60.8 223 31.8
COL.COLO4_10646 Corchorus olitorius HOM05D013808 ORTHO05D010778 2.8e-07 60.1 118 46.6
FAN02G2376 Fragaria x ananassa HOM05D012028 ORTHO05D010778 8.1e-07 58.5 220 29.5
Nn4g23563 Nelumbo nucifera HOM05D011223 ORTHO05D010778 8.1e-07 58.5 225 31.1
ClCG07G016120 Citrullus lanatus HOM05D034995 ORTHO05D010778 1.4e-06 57.8 227 30.4
CsaV3_4G009950 Cucumis sativus L. HOM05D034995 ORTHO05D010778 1.4e-06 57.8 227 29.5
Actinidia36272 Actinidia chinensis HOM05D011223 ORTHO05D010778 5.3e-06 55.8 161 34.2
MD17G1067000 Malus domestica HOM05D012028 ORTHO05D010778 6.9e-06 55.5 272 28.3


User provided reference genes

Program Settings