Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G109232 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.5e-68 262.7 129 100.0
Potri.004G110300 Populus trichocarpa HOM05D009187 ORTHO05D000988 9.1e-58 226.9 129 87.6
Potri.004G109900 Populus trichocarpa HOM05D009187 ORTHO05D000988 2.3e-53 212.2 130 80.0
Potri.004G109000 Populus trichocarpa HOM05D009187 ORTHO05D000988 3.0e-53 211.8 130 81.5
Potri.004G109100 Populus trichocarpa HOM05D009187 ORTHO05D000988 4.4e-52 208.0 130 80.0
Potri.004G109500 Populus trichocarpa HOM05D009187 ORTHO05D000988 2.2e-51 205.7 121 80.2
Potri.004G109600 Populus trichocarpa HOM05D009187 ORTHO05D000988 2.2e-51 205.7 121 80.2
Potri.004G109633 Populus trichocarpa HOM05D009187 ORTHO05D000988 2.2e-51 205.7 121 80.2
Potri.004G109666 Populus trichocarpa HOM05D009187 ORTHO05D000988 2.2e-51 205.7 121 80.2
Potri.004G110651 Populus trichocarpa HOM05D009187 ORTHO05D000988 4.8e-51 204.5 121 79.3
Potri.004G110661 Populus trichocarpa HOM05D009187 ORTHO05D000988 4.8e-51 204.5 121 79.3
Potri.004G110671 Populus trichocarpa HOM05D009187 ORTHO05D000988 4.8e-51 204.5 121 79.3
Potri.004G110000 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.4e-50 203.0 130 77.7
Potri.004G110600 Populus trichocarpa HOM05D009187 ORTHO05D000988 4.1e-50 201.4 121 78.5
Potri.004G110800 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G110825 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G110850 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G110875 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G110901 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G110926 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G110951 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.6e-49 199.5 121 77.7
Potri.004G115001 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G115100 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G115150 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G115201 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G115251 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G115301 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G115351 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-48 196.4 121 76.0
Potri.004G114901 Populus trichocarpa HOM05D009187 ORTHO05D000988 3.8e-48 194.9 121 75.2
Potri.004G110610 Populus trichocarpa HOM05D009187 ORTHO05D000988 8.5e-40 167.2 110 70.9
Potri.004G109732 Populus trichocarpa HOM05D009187 ORTHO05D000988 2.5e-39 165.6 99 81.8
Potri.004G110681 Populus trichocarpa HOM05D009187 ORTHO05D000988 1.3e-32 143.3 86 76.7
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 1.1e-10 70.5 85 37.6
RcHm_v2.0_Chr5g0053271 Rosa chinensis HOM05D008521 ORTHO05D000988 2.7e-09 65.9 79 38.0
RcHm_v2.0_Chr5g0053141 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053151 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053161 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053171 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053181 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053191 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053201 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053211 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053221 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053231 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053241 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053251 Rosa chinensis HOM05D008521 ORTHO05D000988 6.0e-09 64.7 77 37.7
RcHm_v2.0_Chr5g0053111 Rosa chinensis HOM05D008521 ORTHO05D000988 7.8e-09 64.3 77 37.7
RcHm_v2.0_Chr5g0053121 Rosa chinensis HOM05D008521 ORTHO05D000988 1.3e-08 63.5 77 36.4
Prupe.2G086700 Prunus persica HOM05D008521 ORTHO05D001803 1.7e-08 63.2 92 31.5
RcHm_v2.0_Chr5g0046951 Rosa chinensis HOM05D008521 ORTHO05D000988 2.3e-08 62.8 77 35.1
RcHm_v2.0_Chr5g0046961 Rosa chinensis HOM05D008521 ORTHO05D000988 2.3e-08 62.8 77 35.1
RcHm_v2.0_Chr5g0046971 Rosa chinensis HOM05D008521 ORTHO05D000988 2.3e-08 62.8 77 35.1
RcHm_v2.0_Chr5g0051411 Rosa chinensis HOM05D008521 ORTHO05D000988 5.0e-08 61.6 77 33.8
Prupe.2G086800 Prunus persica HOM05D008521 ORTHO05D001803 6.6e-08 61.2 92 31.5
RcHm_v2.0_Chr5g0051281 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051291 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051301 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051311 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051321 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051331 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051341 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051391 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051401 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0051421 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0053391 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0053401 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
RcHm_v2.0_Chr5g0053411 Rosa chinensis HOM05D008521 ORTHO05D000988 6.6e-08 61.2 77 33.8
Prupe.2G086900 Prunus persica HOM05D008521 ORTHO05D001803 1.9e-07 59.7 92 30.4
THA.LOC104803177 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 1.9e-07 59.7 111 31.5
AL585U10020 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 3.3e-07 58.9 117 29.1
THA.LOC104817068 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 3.3e-07 58.9 106 31.1
Aa31sc424G10 Aethionema arabicum HOM05D001614 ORTHO05D000988 4.3e-07 58.5 104 31.7
AL8G17860 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.3e-07 58.5 116 28.4
AL8G17870 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.3e-07 58.5 116 28.4
THA.LOC104803163 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 4.3e-07 58.5 111 30.6
THA.LOC104803164 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 4.3e-07 58.5 111 30.6
THA.LOC104803176 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 4.3e-07 58.5 111 30.6
THA.LOC104803178 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 4.3e-07 58.5 111 30.6
THA.LOC104803180 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 4.3e-07 58.5 111 30.6
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 5.6e-07 58.2 84 33.3
THA.LOC104803173 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 7.3e-07 57.8 111 31.5
CARHR289710 Cardamine hirsuta HOM05D001614 ORTHO05D000988 9.5e-07 57.4 75 34.7
AL8G17850 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 1.2e-06 57.0 117 28.2
AT5G34885 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 1.6e-06 56.6 116 28.4
Aa31LG6G10280 Aethionema arabicum HOM05D001614 ORTHO05D000988 2.1e-06 56.2 104 30.8
AL585U10010 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.1e-06 56.2 116 25.9
CARHR250760 Cardamine hirsuta HOM05D001614 ORTHO05D000988 2.1e-06 56.2 118 23.7
CARHR289730 Cardamine hirsuta HOM05D001614 ORTHO05D000988 2.1e-06 56.2 80 32.5
Thhalv10002260m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 2.1e-06 56.2 112 28.6
THA.LOC104816777 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 2.1e-06 56.2 106 30.2
AL8G17820 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.8e-06 55.8 116 28.4
AL8G17830 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.8e-06 55.8 116 28.4
AL8G17840 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.8e-06 55.8 116 28.4
BcaB01g01427 Brassica carinata HOM05D001614 ORTHO05D000988 2.8e-06 55.8 108 27.8
AT5G34905 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 3.6e-06 55.5 117 27.4
Thhalv10002163m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 3.6e-06 55.5 112 28.6
Carub.0002s0921 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 115 26.1
Carub.0002s0924 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 115 26.1
Carub.0002s0926 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 115 26.1
Carub.0002s0927 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 115 26.1
Carub.0002s0928 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 75 33.3
Carub.0002s0931 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 115 26.1
Carub.0046s0002 Capsella rubella HOM05D001614 ORTHO05D000988 4.7e-06 55.1 116 26.7
CARHR054410 Cardamine hirsuta HOM05D001614 ORTHO05D000988 4.7e-06 55.1 75 33.3
COL.COLO4_33343 Corchorus olitorius HOM05D002073 ORTHO05D001803 4.7e-06 55.1 107 27.1
THA.LOC104803175 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 4.7e-06 55.1 111 29.7
AT1G57775 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 6.2e-06 54.7 73 34.2
AT5G34883 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 6.2e-06 54.7 116 27.6
BraA06t27509Z Brassica rapa HOM05D001614 ORTHO05D000988 6.2e-06 54.7 90 28.9
Carub.0002s0922 Capsella rubella HOM05D001614 ORTHO05D000988 6.2e-06 54.7 75 33.3
Carub.0002s0923 Capsella rubella HOM05D001614 ORTHO05D000988 6.2e-06 54.7 75 33.3
Carub.0002s0930 Capsella rubella HOM05D001614 ORTHO05D000988 6.2e-06 54.7 75 33.3
Carub.0046s0004 Capsella rubella HOM05D001614 ORTHO05D000988 6.2e-06 54.7 75 33.3
Carub.0046s0006 Capsella rubella HOM05D001614 ORTHO05D000988 6.2e-06 54.7 75 33.3
THA.LOC104811129 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 6.2e-06 54.7 116 30.2
AL474U10010 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 8.1e-06 54.3 116 25.0
AL8G19270 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 8.1e-06 54.3 108 27.8
AT5G42567 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 8.1e-06 54.3 116 27.6
C09p37360 Brassica napus HOM05D001614 ORTHO05D000988 8.1e-06 54.3 110 27.3
BolC9t56565H Brassica oleracea HOM05D001614 ORTHO05D000988 8.1e-06 54.3 110 27.3
Thhalv10002294m.g Eutrema salsugineum HOM05D001614 ORTHO05D000988 8.1e-06 54.3 112 26.8


User provided reference genes

Program Settings