Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G107600 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.0e-16 88.6 68 100.0
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 6.1e-13 77.0 68 85.3
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 4.0e-12 74.3 68 79.4
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.5e-11 72.4 68 77.9
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.5e-11 72.4 68 77.9
Potri.004G107500 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.6e-11 71.6 68 88.2
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 4.4e-11 70.9 68 73.5
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.7e-10 68.9 68 70.6
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 1.7e-10 68.9 68 79.4
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 3.7e-10 67.8 68 54.4
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 3.7e-10 67.8 68 54.4
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 4.8e-10 67.4 68 54.4
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 70.6
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 54.4
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 8.3e-10 66.6 68 72.1
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.1e-09 66.2 68 69.1
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-09 66.2 68 52.9
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.1e-09 66.2 65 78.5
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.4e-09 65.9 68 80.9
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.4e-09 65.9 66 68.2
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 66.2
Potri.004G107100 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 85.3
Potri.004G107800 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 85.3
Potri.004G107900 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 85.3
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 2.4e-09 65.1 68 61.8
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 3.1e-09 64.7 68 51.5
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 3.1e-09 64.7 68 70.6
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 4.1e-09 64.3 68 63.2
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 4.1e-09 64.3 68 63.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 5.4e-09 63.9 68 52.9
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 7.0e-09 63.5 68 51.5
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 9.1e-09 63.2 69 63.8
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 9.1e-09 63.2 68 51.5
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.6e-08 62.4 68 52.9
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.0e-08 62.0 68 47.1
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 59.1
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 4.5e-08 60.8 68 72.1
Cpa.g.sc188.25 Carica papaya HOM05D002873 ORTHO05D002978 5.9e-08 60.5 69 71.0
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.0e-07 59.7 68 57.4
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 57.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 65.2
Ciclev10013788m.g Citrus clementina HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 76.5
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 72.7
Atru.chr10.1869 Acer truncatum HOM05D002873 ORTHO05D002978 5.0e-07 57.4 68 76.5
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 8.6e-07 56.6 66 59.1
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 8.6e-07 56.6 65 49.2
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 8.6e-07 56.6 65 49.2
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 1.5e-06 55.8 62 48.4
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 1.5e-06 55.8 66 53.0
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 1.5e-06 55.8 66 47.0
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 1.9e-06 55.5 68 52.9
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 46.3
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 2.5e-06 55.1 68 58.8
Sabra04G0074800 Salix brachista HOM05D002873 ORTHO05D002978 2.5e-06 55.1 68 72.1
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 3.3e-06 54.7 64 45.3
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 41.2
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 41.2
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 41.2
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 41.2
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 41.2
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 59.1
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 70.6
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 43.9
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 62.1
C09p43800 Brassica napus HOM05D002873 ORTHO05D002978 7.2e-06 53.5 68 61.8
BolC9t57265H Brassica oleracea HOM05D002873 ORTHO05D002978 7.2e-06 53.5 68 61.8
Thhalv10015216m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 7.2e-06 53.5 68 61.8
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.2e-06 53.5 66 60.6
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 7.2e-06 53.5 62 62.9
CiPaw.04G005500 Carya illinoinensis HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 61.8
Ca_20747_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 9.5e-06 53.1 63 74.6
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 9.5e-06 53.1 62 50.0
Sed0012567 Sechium edule HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 73.5
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 57.4


User provided reference genes

Program Settings