Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G107100 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.2e-10 68.6 68 100.0
Potri.004G107800 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.2e-10 68.6 68 100.0
Potri.004G107900 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.2e-10 68.6 68 100.0
Potri.004G107600 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.8e-09 65.5 68 85.3
Potri.004G107500 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.1e-09 64.7 68 89.7
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 5.4e-09 63.9 68 77.9
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.2e-08 62.8 68 72.1
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.2e-08 62.8 68 72.1
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.5e-08 61.2 68 67.6
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 3.5e-08 61.2 68 72.1
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 75.0
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 48.5
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 48.5
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 48.5
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 48.5
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 1.9e-06 55.5 68 67.6
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 2.5e-06 55.1 68 73.5
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 3.3e-06 54.7 68 76.5
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 3.3e-06 54.7 68 63.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 3.3e-06 54.7 68 48.5
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 3.3e-06 54.7 66 60.6
Atru.chr10.1869 Acer truncatum HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 83.8
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 57.4
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 58.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 47.1
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 70.8
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 7.2e-06 53.5 68 58.8
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 47.1
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 61.8
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 57.4


User provided reference genes

Program Settings