Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.7e-139 499.6 297 100.0
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 8.3e-123 444.1 301 84.7
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 4.2e-106 388.7 299 78.3
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 1.1e-63 247.7 299 54.2
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 3.3e-63 246.1 192 71.4
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 1.7e-62 243.8 254 61.4
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 3.7e-62 242.7 309 57.0
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 1.5e-60 237.3 307 50.5
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 2.6e-60 236.5 165 73.3
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 2.9e-59 233.0 336 46.4
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.8e-59 232.6 217 60.4
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 2.5e-58 229.9 316 50.9
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 3.2e-58 229.6 192 66.1
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 3.2e-58 229.6 149 77.2
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 7.2e-58 228.4 164 72.0
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 7.2e-58 228.4 295 51.5
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 1.2e-57 227.6 346 43.6
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 2.1e-57 226.9 214 57.5
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 2.1e-57 226.9 182 69.2
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.4e-56 224.2 170 68.8
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 1.8e-56 223.8 187 64.7
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 3.9e-56 222.6 252 54.0
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 5.1e-56 222.2 196 62.8
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.0e-55 220.3 211 59.2
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 2.0e-55 220.3 153 73.9
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 4.4e-55 219.2 182 63.2
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 5.7e-55 218.8 182 63.7
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 7.4e-55 218.4 252 52.8
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 9.7e-55 218.0 252 53.2
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.3e-54 217.6 193 62.2
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 2.8e-54 216.5 182 62.1
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 2.8e-54 216.5 202 63.4
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 3.7e-54 216.1 150 74.0
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 4.8e-54 215.7 196 62.8
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 4.8e-54 215.7 296 47.3
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 6.3e-54 215.3 208 57.2
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 8.2e-54 214.9 182 64.8
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 8.2e-54 214.9 189 60.8
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 8.2e-54 214.9 289 47.1
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.1e-53 214.5 216 56.0
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 1.1e-53 214.5 189 59.8
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.4e-53 214.2 214 56.1
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 2.4e-53 213.4 213 58.2
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 3.1e-53 213.0 162 69.8
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 4.1e-53 212.6 225 56.0
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.5e-52 210.7 316 46.8
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.5e-52 210.7 300 46.7
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 2.0e-52 210.3 262 49.2
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 3.5e-52 209.5 217 55.3
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 4.5e-52 209.1 164 67.1
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 2.2e-51 206.8 344 41.9
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 2.9e-51 206.5 166 65.1
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 3.8e-51 206.1 154 67.5
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 5.0e-51 205.7 171 63.7
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 6.5e-51 205.3 297 44.1
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.9e-50 203.8 220 55.0
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.9e-50 203.8 220 55.0
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 2.5e-50 203.4 159 67.3
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.5e-50 203.4 159 67.3
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 2.5e-50 203.4 165 64.2
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 2.5e-50 203.4 193 59.1
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 5.5e-50 202.2 150 68.0
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 5.5e-50 202.2 150 68.0
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 5.5e-50 202.2 150 68.0
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 5.5e-50 202.2 150 68.0
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 9.4e-50 201.4 134 76.1
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 9.4e-50 201.4 140 72.1
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 1.6e-49 200.7 156 65.4
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.1e-49 200.3 144 70.1
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 8.0e-49 198.4 194 59.3
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.4e-48 197.6 193 56.5
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.8e-48 197.2 298 45.6
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 5.2e-48 195.7 134 73.1
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 5.2e-48 195.7 145 69.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 6.7e-48 195.3 308 46.8
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 6.7e-48 195.3 301 45.8
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 2.6e-47 193.4 191 57.6
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 3.3e-47 193.0 330 45.2
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 4.4e-47 192.6 309 44.3
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 7.4e-47 191.8 191 55.0
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 9.7e-47 191.4 141 70.2
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.3e-46 191.0 302 44.0
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 1.7e-46 190.7 295 48.1
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 2.2e-46 190.3 185 57.3
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 2.8e-46 189.9 181 57.5
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 2.8e-46 189.9 215 52.1
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.7e-46 189.5 132 73.5
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.7e-46 189.5 217 53.9
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 4.8e-46 189.1 315 44.8
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 6.3e-46 188.7 361 40.4
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 8.2e-46 188.3 149 64.4
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 8.2e-46 188.3 197 53.8
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-45 188.0 152 65.8
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 1.8e-45 187.2 189 58.2
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 1.8e-45 187.2 189 58.2
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 3.1e-45 186.4 216 52.3
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 4.1e-45 186.0 302 46.0
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 5.3e-45 185.7 167 58.7
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 5.3e-45 185.7 161 61.5
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 5.3e-45 185.7 161 61.5
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 2.0e-44 183.7 222 50.5
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 3.5e-44 183.0 277 42.6
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.7e-43 180.6 156 60.3
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 1.7e-43 180.6 168 58.3
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 1.7e-43 180.6 214 51.9
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 2.2e-43 180.3 300 47.0
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 3.8e-43 179.5 311 44.4
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 6.5e-43 178.7 320 44.4
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 8.5e-43 178.3 177 57.6
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.5e-42 177.6 309 42.1
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.5e-42 175.6 216 48.6
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.7e-41 173.3 378 38.6
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.6e-41 172.9 228 45.6
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 4.7e-41 172.6 254 45.7
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 6.1e-41 172.2 182 54.4
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.8e-40 170.6 182 55.5
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 4.4e-39 166.0 136 66.2
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.7e-38 164.1 146 60.3
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 8.3e-38 161.8 132 65.9
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 1.8e-37 160.6 176 53.4
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.2e-36 157.9 132 62.1
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.6e-36 157.5 134 59.7
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.0e-36 157.1 183 50.8
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.0e-35 154.8 314 43.6
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-35 154.5 159 56.6
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 2.9e-35 153.3 274 40.1
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.7e-30 137.5 144 54.2
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 3.5e-28 129.8 150 49.3
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 5.9e-28 129.0 93 69.9
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.8e-27 126.3 100 68.0
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 5.0e-27 125.9 138 47.8
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 5.2e-24 115.9 132 46.2
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 6.8e-24 115.5 154 43.5
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 7.8e-20 102.1 89 59.6
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 1.7e-19 100.9 136 46.3
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 1.0e-16 91.7 83 63.9
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 3.1e-16 90.1 107 44.9
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 3.4e-15 86.7 100 52.0
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.3e-14 84.7 135 40.0
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 1.4e-13 81.3 86 50.0
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 2.7e-12 77.0 154 31.8
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 3.0e-11 73.6 202 30.7
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 9.5e-10 68.6 57 59.6
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 3.6e-09 66.6 143 35.0


User provided reference genes

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