Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 0.0e+00 1078.5 650 100.0
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 4.2e-268 927.9 646 80.0
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.1e-248 862.4 655 71.3
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.1e-227 792.7 739 62.0
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 6.4e-176 621.7 517 65.0
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.3e-157 560.8 520 59.4
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 6.2e-155 552.0 518 59.1
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 6.9e-154 548.5 515 59.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 7.6e-153 545.0 515 57.7
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 2.2e-152 543.5 536 57.6
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.6e-150 537.3 522 58.2
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.3e-149 534.3 520 57.9
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 5.1e-149 532.3 504 57.9
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 4.3e-148 529.3 521 58.2
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.2e-145 521.2 506 58.1
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 3.4e-145 519.6 546 55.7
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 3.8e-144 516.2 504 57.7
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 6.4e-144 515.4 520 56.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.4e-143 514.2 512 57.6
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 5.4e-143 512.3 489 58.9
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 7.9e-142 508.4 472 58.9
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.0e-141 508.1 593 50.1
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.9e-141 506.1 532 55.8
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.1e-140 504.6 532 55.1
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.5e-137 494.2 499 57.1
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 4.5e-137 492.7 506 55.9
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.3e-136 491.1 501 56.9
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 2.2e-136 490.3 475 55.4
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 5.5e-135 485.7 469 57.8
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.2e-134 484.6 464 56.0
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 7.4e-132 475.3 480 56.7
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 9.6e-132 474.9 464 57.3
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.1e-130 471.5 528 53.6
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.4e-130 471.1 477 57.2
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.4e-130 471.1 528 53.6
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.2e-129 468.0 528 53.2
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 7.6e-129 465.3 412 61.2
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.0e-128 464.9 506 53.6
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 1.1e-127 461.5 512 52.7
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.9e-127 460.7 446 56.1
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 7.1e-127 458.8 426 59.6
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.2e-126 458.0 526 52.5
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.1e-126 457.2 669 43.3
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 7.9e-126 455.3 501 53.1
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 7.9e-126 455.3 503 52.7
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.0e-125 454.9 486 53.1
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 3.9e-125 453.0 417 60.2
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 3.9e-125 453.0 472 52.5
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 6.7e-125 452.2 466 53.9
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.5e-124 451.1 518 51.9
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.5e-124 451.1 501 53.5
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.9e-124 450.7 503 52.7
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.3e-124 449.9 445 56.0
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.7e-124 449.1 452 56.9
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 9.7e-124 448.4 417 60.0
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.3e-123 448.0 469 54.2
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.1e-122 444.9 398 58.3
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 5.3e-122 442.6 470 51.5
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.0e-120 438.3 465 53.8
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 5.0e-120 436.0 510 51.6
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 6.5e-120 435.6 403 60.0
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.2e-118 431.4 476 54.2
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 3.6e-118 429.9 479 53.4
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.5e-116 423.7 450 56.0
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 9.7e-116 421.8 505 50.5
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 1.7e-115 421.0 472 53.2
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 6.3e-115 419.1 393 56.5
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.1e-114 416.8 417 54.9
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 3.1e-114 416.8 498 49.8
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 1.2e-113 414.8 438 55.9
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.4e-113 413.3 462 52.6
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.9e-113 412.5 503 49.7
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.3e-112 411.4 460 52.0
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 3.8e-112 409.8 517 50.3
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.4e-111 407.9 449 54.1
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 4.2e-111 406.4 440 52.5
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 5.1e-109 399.4 402 54.5
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 1.1e-108 398.3 501 48.1
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 9.7e-108 395.2 379 58.3
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.3e-107 394.8 554 44.4
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 6.3e-107 392.5 486 49.2
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 1.4e-106 391.3 455 50.8
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.4e-106 391.3 446 51.3
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 5.3e-106 389.4 476 48.3
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 9.1e-106 388.7 454 49.1
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 8.5e-104 382.1 458 50.0
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 1.1e-103 381.7 394 53.8
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 5.5e-103 379.4 451 48.8
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 2.1e-102 377.5 430 50.2
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 6.1e-102 375.9 439 49.0
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.3e-101 374.0 505 45.7
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 3.9e-101 373.2 388 54.1
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 5.2e-101 372.9 388 53.9
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 8.8e-101 372.1 455 48.8
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-100 371.3 398 52.8
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.0e-100 370.9 359 57.1
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 4.4e-100 369.8 498 46.4
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.3e-99 368.2 432 47.7
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 4.8e-99 366.3 398 52.3
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 4.8e-99 366.3 398 52.3
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 8.2e-99 365.5 471 45.9
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 5.3e-98 362.8 433 49.7
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.9e-97 359.4 448 48.4
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.7e-96 357.8 450 48.0
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.9e-96 357.1 439 47.2
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 5.0e-96 356.3 424 49.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 5.5e-95 352.8 431 49.2
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 9.4e-95 352.1 366 52.7
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 4.0e-93 346.7 440 48.2
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 5.2e-93 346.3 444 48.0
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 6.8e-93 345.9 455 47.3
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.5e-92 344.7 522 43.3
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 9.8e-92 342.0 439 47.6
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.3e-91 341.7 438 47.7
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.3e-91 341.7 438 47.7
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 4.5e-89 333.2 454 46.0
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 4.2e-87 326.6 515 42.1
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.4e-85 321.6 446 45.3
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 8.3e-83 312.4 420 45.5
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.1e-82 310.1 381 47.0
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.2e-81 308.5 416 45.7
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.1e-79 302.0 260 58.1
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.9e-79 301.2 441 42.9
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.9e-79 301.2 441 44.9
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.3e-79 300.4 312 51.9
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.2e-76 292.0 286 57.0
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.9e-75 286.6 278 57.6
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.1e-74 285.4 282 56.4
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.9e-72 276.9 207 64.3
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.2e-68 265.4 234 61.1
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.5e-65 253.8 312 49.0
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 6.0e-65 253.1 237 58.2
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 5.0e-64 250.0 369 41.7
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.3e-61 241.1 366 40.4
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.9e-58 231.5 405 38.0
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 5.4e-50 203.4 238 53.4
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 9.2e-50 202.6 366 37.7
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 5.6e-47 193.4 236 52.1
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 2.6e-44 184.5 199 50.3
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.1e-39 169.1 447 33.6
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.1e-37 161.0 246 49.2
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 6.9e-37 159.8 473 30.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 2.9e-35 154.5 522 30.8
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 3.3e-31 141.0 167 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 2.6e-28 131.3 201 37.8
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 8.7e-24 116.3 206 35.0
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.7e-22 110.9 142 43.7
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 2.4e-21 108.2 392 27.3
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.1e-13 81.3 142 37.3
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 2.1e-09 68.6 52 63.5
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.0e-08 64.7 42 76.2
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 1.9e-07 62.0 80 40.0
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.8e-06 57.4 128 33.6


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