Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.9e-201 705.7 369 100.0
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 4.7e-160 568.2 368 81.8
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 4.2e-148 528.5 382 75.4
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 4.3e-121 438.7 378 65.9
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.0e-105 386.7 400 57.5
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 4.8e-104 382.1 375 57.1
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.8e-101 372.5 396 55.8
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 2.0e-97 360.1 400 54.0
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.1e-95 354.4 383 53.3
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 1.8e-95 353.6 383 54.3
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 4.1e-95 352.4 396 54.0
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 2.7e-94 349.7 416 52.2
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 6.5e-93 345.1 387 51.7
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 8.5e-93 344.7 387 51.7
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.8e-90 337.0 397 52.6
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 4.4e-89 332.4 386 52.6
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 9.8e-89 331.3 393 52.4
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 3.7e-88 329.3 396 50.3
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 3.7e-88 329.3 374 53.7
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 7.0e-87 325.1 377 52.8
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 7.0e-87 325.1 493 44.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.2e-86 324.3 400 48.8
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 2.0e-86 323.6 391 48.8
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.5e-86 322.8 398 49.2
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 2.5e-84 316.6 376 50.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 3.3e-84 316.2 387 51.9
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 9.5e-84 314.7 388 50.5
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 5.2e-82 308.9 389 49.9
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 6.8e-82 308.5 375 50.9
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.0e-81 307.0 388 49.7
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 7.5e-81 305.1 393 49.4
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.7e-80 303.9 391 49.6
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.2e-80 303.5 389 49.4
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.2e-80 303.5 350 52.9
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 6.3e-80 302.0 404 48.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.7e-77 293.9 386 47.9
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 2.9e-77 293.1 390 45.9
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 1.0e-74 284.6 411 43.3
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 5.8e-73 278.9 400 45.8
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 7.5e-73 278.5 409 42.5
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 2.9e-72 276.6 413 44.6
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.1e-71 274.6 391 45.8
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.9e-71 273.9 384 46.1
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 7.0e-71 271.9 412 43.9
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.3e-69 267.7 391 43.0
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.1e-68 264.6 399 43.4
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 7.3e-68 261.9 386 44.6
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 7.3e-68 261.9 406 43.8
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 7.3e-68 261.9 382 44.5
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.8e-66 257.3 388 44.1
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 3.1e-66 256.5 402 45.0
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 4.0e-66 256.1 392 44.9
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 5.2e-66 255.8 416 43.5
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.2e-66 255.8 379 45.1
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 3.4e-65 253.1 399 41.1
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 6.4e-64 248.8 379 44.6
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 8.3e-64 248.4 413 42.1
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.9e-63 247.3 356 46.9
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.1e-62 243.8 378 43.9
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.3e-61 241.1 294 50.0
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.3e-61 241.1 356 46.1
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 1.7e-61 240.7 410 40.2
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 6.6e-61 238.8 374 43.9
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 3.3e-60 236.5 412 40.8
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.4e-58 231.1 384 43.2
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 2.3e-58 230.3 375 43.2
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 2.0e-57 227.3 372 41.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 2.6e-57 226.9 370 42.2
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 4.4e-57 226.1 289 51.2
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 4.9e-56 222.6 272 47.8
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.2e-54 218.0 252 48.0
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.6e-54 217.6 306 43.5
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 2.1e-51 207.2 518 33.0
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.1e-47 194.9 404 36.6
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.0e-45 188.3 404 34.9
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 2.3e-45 187.2 227 48.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 3.0e-45 186.8 372 36.6
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 3.3e-44 183.3 251 47.8
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.8e-43 179.5 228 46.9
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.8e-43 179.5 259 42.1
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 5.8e-41 172.6 294 40.1
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 2.7e-38 163.7 210 47.6
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.3e-37 161.4 186 50.5
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 2.3e-37 160.6 501 30.3
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 9.6e-28 128.6 185 43.8
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 4.8e-27 126.3 116 58.6
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 2.5e-23 114.0 378 31.7
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 4.6e-22 109.8 155 47.7
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 7.9e-22 109.0 104 54.8
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 5.7e-20 102.8 385 30.1
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 1.8e-18 97.8 95 47.4
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.7e-16 91.3 198 31.8
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.5e-12 78.2 97 45.4
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 1.5e-12 78.2 140 39.3
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 9.7e-12 75.5 99 48.5
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.3e-11 75.1 110 40.9
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 5.3e-10 69.7 104 39.4
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 2.6e-09 67.4 219 24.7
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 1.3e-08 65.1 86 39.5
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.9e-08 63.9 65 49.2
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 2.5e-07 60.8 139 28.8
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 7.9e-06 55.8 63 54.0


User provided reference genes

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