Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 3.0e-89 332.0 195 100.0
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 2.2e-79 299.3 195 86.2
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 7.0e-62 241.1 198 71.7
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.9e-27 126.7 228 39.5
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.5e-27 126.3 217 38.2
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 5.6e-27 125.2 213 39.4
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 6.9e-25 118.2 221 39.8
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 9.0e-25 117.9 219 39.3
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 2.6e-24 116.3 228 38.6
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 2.6e-24 116.3 220 38.2
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 3.2e-22 109.4 221 37.6
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 5.4e-22 108.6 220 37.7
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.2e-21 107.5 222 37.4
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.7e-21 106.3 217 37.3
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 4.6e-21 105.5 208 38.9
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.0e-20 104.4 216 35.2
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.4e-19 98.2 214 35.0
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 8.1e-18 94.7 214 34.1
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.8e-17 93.6 219 36.1
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 4.0e-17 92.4 207 37.2
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 9.0e-17 91.3 214 33.2
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.2e-16 90.9 178 37.6
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 3.4e-16 89.4 166 34.9
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 3.4e-16 89.4 222 34.2
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 5.8e-16 88.6 128 46.1
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 9.9e-16 87.8 221 32.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 2.2e-15 86.7 207 35.3
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 2.9e-15 86.3 208 31.7
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 2.9e-15 86.3 219 35.2
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.8e-15 85.9 221 31.7
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.8e-15 85.9 221 31.7
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 8.4e-15 84.7 229 32.8
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.9e-14 83.6 196 34.7
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.2e-13 80.9 224 33.9
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.2e-13 80.9 194 34.5
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 4.6e-13 79.0 118 40.7
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 4.6e-13 79.0 170 35.3
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 6.0e-13 78.6 216 31.5
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 6.0e-13 78.6 119 34.5
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 6.0e-13 78.6 206 34.0
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.3e-12 77.4 184 32.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.9e-12 75.9 128 41.4
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.1e-11 74.3 127 44.1
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.5e-11 73.9 211 33.2
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.5e-11 73.9 124 39.5
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 2.5e-11 73.2 121 38.8
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 5.6e-11 72.0 112 35.7
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 7.4e-11 71.6 124 38.7
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 7.4e-11 71.6 119 37.0
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 9.6e-11 71.2 129 40.3
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.1e-10 70.1 198 32.3
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.1e-10 70.1 224 32.6
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.1e-10 70.1 117 37.6
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 2.1e-10 70.1 217 29.5
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 2.1e-10 70.1 120 36.7
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 2.8e-10 69.7 192 31.8
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 8.2e-10 68.2 131 38.2
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.4e-09 67.4 122 38.5
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 1.8e-09 67.0 192 31.2
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 4.0e-09 65.9 124 39.5
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.0e-08 63.5 125 38.4
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.6e-08 63.2 128 33.6
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 3.4e-08 62.8 216 31.5
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 4.5e-08 62.4 123 35.0
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 4.5e-08 62.4 202 30.7
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 4.5e-08 62.4 202 30.7
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 5.8e-08 62.0 209 28.7
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 5.8e-08 62.0 105 40.0
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 5.8e-08 62.0 204 31.9
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 5.8e-08 62.0 114 34.2
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.6e-08 61.6 107 38.3
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 7.6e-08 61.6 124 37.9
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 7.6e-08 61.6 131 35.1
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 1.3e-07 60.8 114 36.0
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.7e-07 60.5 56 55.4
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 1.7e-07 60.5 114 36.0
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.7e-07 60.5 203 30.5
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.9e-07 59.7 74 40.5
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.9e-07 58.9 113 34.5
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 4.9e-07 58.9 190 30.5
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 6.5e-07 58.5 154 27.3
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 6.5e-07 58.5 205 39.5
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 1.4e-06 57.4 118 36.4
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 4.2e-06 55.8 180 27.2
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 4.2e-06 55.8 117 35.9
AUR62031402 Chenopodium quinoa HOM05D014004 ORTHO05D015823 5.5e-06 55.5 109 34.9
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 5.5e-06 55.5 204 28.9
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 5.5e-06 55.5 65 46.2
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 7.1e-06 55.1 43 48.8
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 7.1e-06 55.1 95 36.8
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 9.3e-06 54.7 95 36.8


User provided reference genes

Program Settings