Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 3.4e-106 388.7 246 100.0
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 2.2e-76 289.7 251 77.7
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 2.0e-58 229.9 207 69.6
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 3.7e-52 209.1 194 72.7
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 8.1e-47 191.4 266 50.8
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 8.6e-41 171.4 200 59.5
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 1.2e-39 167.5 246 48.4
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 2.6e-37 159.8 254 51.2
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 6.4e-36 155.2 265 45.3
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 1.4e-35 154.1 255 40.0
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 7.1e-35 151.8 264 50.0
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 1.9e-32 143.7 268 44.0
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 2.5e-32 143.3 148 57.4
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 3.3e-32 142.9 243 40.3
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 1.2e-31 141.0 218 43.6
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 2.8e-31 139.8 266 43.2
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 3.6e-31 139.4 254 43.3
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 8.1e-31 138.3 276 47.5
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 1.8e-30 137.1 214 48.6
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 3.1e-30 136.3 270 42.6
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 3.1e-30 136.3 272 42.6
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 4.0e-30 136.0 196 49.0
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 6.9e-30 135.2 269 47.6
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 6.9e-30 135.2 270 42.2
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 6.9e-30 135.2 270 42.2
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 1.5e-29 134.0 202 48.5
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 2.6e-29 133.3 251 45.8
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 2.6e-29 133.3 221 45.2
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 7.6e-29 131.7 271 36.9
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 7.6e-29 131.7 215 47.0
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 1.3e-28 131.0 219 47.0
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 1.7e-28 130.6 256 38.3
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 2.2e-28 130.2 286 43.4
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 2.2e-28 130.2 264 36.4
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 2.2e-28 130.2 102 60.8
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 3.8e-28 129.4 259 46.7
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 6.4e-28 128.6 190 48.4
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 8.4e-28 128.3 255 39.2
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 8.4e-28 128.3 201 50.2
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 3.2e-27 126.3 263 39.9
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 5.4e-27 125.6 223 41.3
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 2.7e-26 123.2 288 35.4
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 2.7e-26 123.2 258 41.5
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 3.5e-26 122.9 203 45.8
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 4.6e-26 122.5 257 43.6
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 4.6e-26 122.5 196 50.0
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 7.8e-26 121.7 212 43.9
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 1.7e-25 120.6 262 42.7
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 3.0e-25 119.8 260 43.8
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 3.0e-25 119.8 270 38.1
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 3.9e-25 119.4 220 44.5
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 3.9e-25 119.4 279 39.4
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 5.1e-25 119.0 209 45.5
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 6.6e-25 118.6 204 47.1
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 6.6e-25 118.6 179 48.0
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 6.6e-25 118.6 262 42.0
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 1.1e-24 117.9 97 62.9
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 2.5e-24 116.7 200 41.0
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 3.3e-24 116.3 97 61.9
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 5.6e-24 115.5 206 44.2
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 1.3e-23 114.4 182 45.6
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 1.3e-23 114.4 206 41.7
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.3e-23 114.4 206 41.7
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 1.6e-23 114.0 216 43.1
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 2.1e-23 113.6 197 45.2
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 2.8e-23 113.2 258 38.8
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 2.8e-23 113.2 267 38.6
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 3.6e-23 112.8 269 38.7
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 4.8e-23 112.5 266 37.2
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 8.1e-23 111.7 204 44.6
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.8e-22 110.5 214 37.9
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 2.4e-22 110.2 204 39.2
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 3.1e-22 109.8 261 38.7
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 5.3e-22 109.0 225 37.3
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.2e-21 107.8 210 39.0
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 2.6e-21 106.7 265 38.9
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 3.4e-21 106.3 213 38.0
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 4.5e-21 105.9 200 43.0
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 4.5e-21 105.9 256 35.5
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 5.8e-21 105.5 210 38.6
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-21 105.5 88 61.4
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 1.3e-20 104.4 201 42.3
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 1.3e-20 104.4 283 36.0
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.7e-20 104.0 276 37.0
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 3.8e-20 102.8 225 38.7
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 1.1e-19 101.3 263 34.6
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 1.9e-19 100.5 261 40.6
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 2.4e-19 100.1 263 34.6
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 3.2e-19 99.8 200 43.0
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 9.3e-19 98.2 258 40.7
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 4.6e-18 95.9 222 42.3
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 3.0e-17 93.2 227 37.0
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 5.1e-17 92.4 109 48.6
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 2.1e-15 87.0 60 75.0
Sabra02G0148900 Salix brachista HOM05D005274 ORTHO05D006485 3.6e-15 86.3 57 80.7
Sabra10G0082800 Salix brachista HOM05D005274 ORTHO05D006485 3.6e-15 86.3 57 80.7
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 4.8e-15 85.9 56 78.6
Sabra07G0113400 Salix brachista HOM05D005274 ORTHO05D006485 8.1e-15 85.1 56 76.8
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 1.1e-14 84.7 91 50.5
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 1.1e-14 84.7 54 83.3
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 5.3e-14 82.4 80 51.2
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 2.6e-13 80.1 161 34.8
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 2.2e-12 77.0 95 46.3
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 2.9e-12 76.6 92 45.7
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 2.9e-12 76.6 93 45.2
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 3.8e-12 76.3 80 48.8
CBR_g32195 Chara braunii HOM05D007158 ORTHO05D007424 3.8e-12 76.3 73 47.9
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 1.1e-11 74.7 94 43.6
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 4.2e-11 72.8 167 33.5
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 4.2e-11 72.8 177 35.0
BolC1t03688H Brassica oleracea HOM05D011338 ORTHO05D007424 5.5e-11 72.4 206 35.0
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 2.1e-10 70.5 168 40.5
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 2.1e-10 70.5 168 40.5
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 2.1e-10 70.5 39 89.7
AL2G15950 Arabidopsis lyrata HOM05D011338 ORTHO05D007424 3.5e-10 69.7 99 44.4
Thhalv10023615m.g Eutrema salsugineum HOM05D011338 ORTHO05D007424 3.5e-10 69.7 95 44.2
AT1G60640 Arabidopsis thaliana HOM05D007158 ORTHO05D007424 6.0e-10 68.9 210 32.9
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 1.0e-09 68.2 80 46.2
BcaC06g31815 Brassica carinata HOM05D011338 ORTHO05D007424 9.6e-08 61.6 166 40.4
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.3e-07 61.2 39 79.5
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 1.6e-07 60.8 34 88.2
Aa31LG2G9720 Aethionema arabicum HOM05D011338 ORTHO05D007424 8.1e-07 58.5 199 31.7
A09p17410 Brassica napus HOM05D036217 ORTHO05D007424 1.8e-06 57.4 67 46.3
CARHR052300 Cardamine hirsuta HOM05D011338 ORTHO05D007424 1.8e-06 57.4 69 46.4
MBI16_g21167_MAGBIO Magnolia biondii HOM05D007158 ORTHO05D007424 1.8e-06 57.4 76 52.6


User provided reference genes

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