Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 2.6e-242 842.0 554 100.0
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 2.8e-196 689.1 554 87.5
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.3e-129 467.6 561 67.2
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 2.2e-129 466.8 559 63.9
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 3.8e-129 466.1 560 67.9
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.8e-126 457.2 555 59.8
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 2.0e-125 453.8 546 63.7
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.4e-123 447.6 558 63.1
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.4e-123 447.6 560 63.9
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.1e-123 446.0 559 63.0
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 5.5e-120 435.6 561 53.3
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 2.5e-112 410.2 553 53.7
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.6e-111 407.5 667 48.3
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 2.7e-111 406.8 554 61.0
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 4.7e-111 406.0 467 66.4
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 2.0e-109 400.6 572 52.3
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 5.7e-109 399.1 555 58.2
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 7.5e-109 398.7 558 51.1
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.3e-108 397.9 562 52.1
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 3.1e-107 393.3 527 54.6
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 3.1e-107 393.3 528 56.1
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 5.4e-107 392.5 507 57.0
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 4.5e-106 389.4 560 58.0
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 6.6e-105 385.6 521 56.0
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 5.5e-104 382.5 556 57.7
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 9.5e-104 381.7 538 54.6
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 6.1e-103 379.0 566 56.4
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 3.0e-102 376.7 506 60.5
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 6.8e-102 375.6 563 50.4
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 6.8e-102 375.6 522 55.4
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 8.9e-102 375.2 555 50.3
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 8.9e-102 375.2 564 55.0
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.5e-101 374.4 523 53.3
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 2.0e-101 374.0 526 54.9
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 3.4e-101 373.2 525 54.1
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 5.7e-101 372.5 566 56.2
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.7e-100 370.9 566 55.7
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.2e-100 370.5 562 61.6
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 3.7e-100 369.8 561 49.4
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 4.9e-100 369.4 563 49.7
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 6.3e-100 369.0 484 57.0
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 8.3e-100 368.6 556 49.8
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 1.1e-99 368.2 560 58.0
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 4.1e-99 366.3 517 54.5
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 7.0e-99 365.5 567 55.9
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 9.2e-99 365.2 553 57.1
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 2.0e-98 364.0 560 58.6
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 3.9e-97 359.8 564 55.0
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 6.6e-97 359.0 551 58.6
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 8.6e-97 358.6 543 58.7
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.2e-95 354.8 560 57.7
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 3.2e-91 340.1 587 54.7
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 6.6e-89 332.4 506 53.4
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 3.3e-88 330.1 422 56.4
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 4.3e-88 329.7 568 39.6
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 8.9e-86 322.0 557 47.6
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.0e-85 320.9 556 48.2
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 3.9e-81 306.6 459 57.3
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.8e-79 300.4 485 56.7
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 6.2e-79 299.3 541 46.0
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 8.9e-78 295.4 491 46.4
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 9.9e-77 292.0 418 47.4
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.7e-76 291.2 478 50.6
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 3.2e-75 287.0 510 47.1
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 2.1e-74 284.3 492 47.6
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 2.4e-70 270.8 509 36.7
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 3.1e-70 270.4 253 60.9
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.5e-69 268.1 491 45.2
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 3.4e-69 266.9 528 44.3
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 4.4e-69 266.5 275 54.2
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 8.4e-68 262.3 553 50.6
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 3.2e-67 260.4 462 48.7
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 4.2e-67 260.0 377 59.2
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.9e-65 253.4 278 52.2
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 8.7e-65 252.3 486 36.0
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 3.3e-64 250.4 284 48.2
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 4.8e-63 246.5 264 53.4
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 3.2e-59 233.8 344 55.2
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 6.0e-58 229.6 264 52.3
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 6.0e-58 229.6 321 57.6
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 4.0e-54 216.9 488 42.6
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.8e-46 191.4 179 55.3
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 2.8e-39 167.5 272 64.7
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 4.8e-39 166.8 272 65.1
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 1.4e-38 165.2 182 51.1
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.5e-35 154.5 134 53.0
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 5.5e-35 153.3 184 49.5
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 5.1e-33 146.7 395 50.4
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 4.5e-29 133.7 239 58.2
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.3e-28 132.1 93 66.7
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 6.5e-28 129.8 190 46.8
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 6.5e-28 129.8 177 48.0
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 9.7e-24 115.9 568 29.0
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 3.7e-23 114.0 178 42.7
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.1e-22 112.5 143 46.9
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.1e-22 112.5 114 49.1
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 7.7e-21 106.3 117 43.6
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-19 102.4 86 54.7
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-19 102.4 173 43.4
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 2.3e-17 94.7 210 31.4
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 6.7e-17 93.2 126 46.8
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 8.8e-17 92.8 100 52.0
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.8e-14 85.1 122 40.2
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 2.4e-14 84.7 133 42.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.5e-13 82.0 437 31.1
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 1.5e-11 75.5 233 31.8
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 5.5e-11 73.6 65 49.2
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 6.1e-10 70.1 75 50.7
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.1e-08 65.9 48 66.7
arahy.Tifrunner.gnm1.ann1.7360MD Arachis hypogaea HOM05D002184 ORTHO05D002379 1.7e-07 62.0 82 45.1
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 3.7e-07 60.8 68 45.6
QL02p059301 Quercus lobata HOM05D006674 ORTHO05D012891 3.7e-07 60.8 184 30.4
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 6.3e-07 60.1 48 58.3
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 1.4e-06 58.9 65 47.7
arahy.Tifrunner.gnm1.ann1.67ZR0E Arachis hypogaea HOM05D002184 ORTHO05D002379 1.8e-06 58.5 69 52.2
arahy.Tifrunner.gnm1.ann1.EJ6VAJ Arachis hypogaea HOM05D002184 ORTHO05D002379 1.8e-06 58.5 69 52.2


User provided reference genes

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