Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.6e-72 276.2 155 100.0
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 1.8e-68 262.7 151 95.4
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 7.8e-56 220.7 147 78.2
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 7.8e-56 220.7 149 78.5
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 7.8e-56 220.7 149 79.2
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.3e-55 219.9 147 78.2
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.5e-54 216.5 152 80.3
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 7.3e-54 214.2 151 76.8
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 1.6e-53 213.0 145 80.0
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 2.1e-53 212.6 151 78.1
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 2.8e-53 212.2 145 78.6
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.0e-51 206.1 147 77.6
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 4.4e-51 204.9 135 80.0
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 9.9e-51 203.8 146 75.3
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.9e-49 199.5 141 80.1
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 9.2e-49 197.2 154 70.8
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 9.2e-49 197.2 154 70.8
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 6.0e-48 194.5 151 68.9
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.0e-47 193.7 155 69.7
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.3e-47 193.4 150 68.7
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.3e-47 193.4 149 73.8
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 6.6e-47 191.0 148 69.6
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.9e-46 189.5 145 70.3
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 3.3e-46 188.7 157 67.5
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 2.1e-45 186.0 152 66.4
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 2.8e-45 185.7 152 67.1
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 3.6e-45 185.3 143 72.0
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 8.1e-45 184.1 156 66.7
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.4e-44 183.3 146 69.2
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.4e-44 183.3 143 69.9
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.8e-44 183.0 159 66.7
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.4e-44 182.6 150 68.0
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.4e-44 182.6 154 64.9
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.4e-44 182.6 154 64.9
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 2.4e-44 182.6 144 72.9
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 3.1e-44 182.2 149 68.5
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 4.0e-44 181.8 151 64.9
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 6.9e-44 181.0 141 69.5
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.2e-43 180.3 154 66.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 1.2e-43 180.3 160 64.4
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.2e-43 180.3 160 64.4
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 2.0e-43 179.5 172 62.8
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 2.0e-43 179.5 148 69.6
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 2.6e-43 179.1 154 66.9
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 3.4e-43 178.7 154 63.6
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 3.4e-43 178.7 154 63.6
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.4e-43 178.3 159 64.2
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 5.8e-43 177.9 137 69.3
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 5.8e-43 177.9 157 64.3
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 9.9e-43 177.2 148 66.9
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 9.9e-43 177.2 157 69.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.3e-42 176.8 141 67.4
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.3e-42 176.8 130 70.8
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.3e-42 176.8 154 63.0
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.9e-42 175.6 159 67.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 2.9e-42 175.6 148 65.5
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 4.9e-42 174.9 133 72.2
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 6.4e-42 174.5 147 64.6
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 6.4e-42 174.5 155 64.5
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 8.4e-42 174.1 164 65.9
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 2.4e-41 172.6 160 63.1
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 2.4e-41 172.6 145 67.6
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 3.2e-41 172.2 147 65.3
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 3.2e-41 172.2 141 66.7
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 2.7e-40 169.1 147 66.0
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 7.8e-40 167.5 147 63.3
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.0e-39 167.2 151 68.9
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.0e-39 167.2 147 60.5
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 3.0e-39 165.6 151 68.2
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 5.1e-39 164.9 150 66.7
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 8.7e-39 164.1 147 62.6
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 8.7e-39 164.1 150 67.3
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.5e-38 163.3 166 63.9
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 3.3e-38 162.2 165 60.0
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 7.3e-38 161.0 147 61.9
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 9.6e-38 160.6 153 66.7
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 2.1e-37 159.5 96 82.3
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 2.1e-37 159.5 145 62.8
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 2.8e-37 159.1 147 59.9
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 8.1e-37 157.5 147 63.3
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 1.1e-36 157.1 161 62.7
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.4e-36 156.8 149 58.4
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.4e-36 156.8 167 60.5
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 2.4e-36 156.0 163 56.4
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 5.3e-36 154.8 147 59.2
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 5.3e-36 154.8 147 59.2
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 1.2e-35 153.7 147 59.2
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 1.2e-35 153.7 147 59.2
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.2e-35 153.7 163 58.9
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 1.5e-35 153.3 156 57.7
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.6e-32 143.3 94 71.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 6.0e-32 141.4 146 61.0
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.0e-31 140.6 96 74.0
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.8e-31 139.8 156 55.8
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 3.0e-31 139.0 150 55.3
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 2.5e-30 136.0 136 64.7
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 2.8e-29 132.5 141 53.9
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 6.9e-28 127.9 145 58.6
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 2.9e-26 122.5 152 51.3
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 3.8e-26 122.1 175 42.9
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 4.9e-26 121.7 100 70.0
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.4e-25 120.2 171 43.3
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 2.1e-24 116.3 131 51.9
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-24 115.9 142 49.3
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-24 115.9 145 50.3
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.5e-24 115.5 145 49.0
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 4.6e-24 115.2 142 48.6
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 4.6e-24 115.2 141 51.8
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 6.0e-24 114.8 86 67.4
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.0e-23 114.0 82 73.2
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.3e-23 113.6 144 51.4
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 5.1e-23 111.7 84 66.7
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 3.3e-22 109.0 141 48.9
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.6e-21 106.7 131 48.9
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 6.9e-20 101.3 120 56.7
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 9.0e-20 100.9 96 60.4
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.8e-19 98.2 102 56.9
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 6.5e-18 94.7 137 46.0
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 1.1e-17 94.0 101 48.5
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 3.2e-17 92.4 107 50.5
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 2.3e-15 86.3 57 77.2
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 2.2e-13 79.7 102 51.0
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.7e-10 70.1 134 39.6
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 1.1e-09 67.4 69 55.1
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 2.0e-06 56.6 95 38.9
ECA238G2216 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.3e-06 55.5 42 71.4


User provided reference genes

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