Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G065300 Populus trichocarpa HOM05D007074 ORTHO05D008542 4.9e-129 464.5 245 100.0
Potri.011G083600 Populus trichocarpa HOM05D007074 ORTHO05D008542 2.6e-69 266.2 247 62.3
Manes.17G071900 Manihot esculenta HOM05D007074 ORTHO05D008542 1.5e-40 170.6 267 49.4
Manes.15G123200 Manihot esculenta HOM05D007074 ORTHO05D008542 1.1e-35 154.5 266 45.5
QL05p057294 Quercus lobata HOM05D007074 ORTHO05D008542 4.3e-32 142.5 254 44.9
Thecc.06G148300 Theobroma cacao HOM05D007074 ORTHO05D008542 1.4e-30 137.5 265 41.1
Prupe.4G082900 Prunus persica HOM05D007074 ORTHO05D008542 2.4e-27 126.7 261 40.6
Cfa000927 Carpinus fangiana HOM05D007074 ORTHO05D008542 2.7e-26 123.2 258 41.9
MD05G1281700 Malus domestica HOM05D007074 ORTHO05D008542 8.6e-25 118.2 253 37.5
Ciclev10017572m.g Citrus clementina HOM05D007074 ORTHO05D008542 1.1e-24 117.9 269 41.3
MD10G1260500 Malus domestica HOM05D007074 ORTHO05D008542 1.5e-24 117.5 255 40.0
CiPaw.10G090600 Carya illinoinensis HOM05D007074 ORTHO05D008542 4.3e-24 115.9 270 34.4
TWI53G1156 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 6.8e-22 108.6 239 41.4
CiPaw.09G122000 Carya illinoinensis HOM05D007074 ORTHO05D008542 1.2e-21 107.8 264 34.8
COL.COLO4_31042 Corchorus olitorius HOM05D007074 ORTHO05D008542 5.8e-21 105.5 244 37.3
Gohir.A05G147500 Gossypium hirsutum HOM05D007074 ORTHO05D008542 5.8e-21 105.5 278 35.3
Gorai.009G154100 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.3e-20 104.4 271 35.8
FAN21G0051 Fragaria x ananassa HOM05D007074 ORTHO05D008542 1.7e-20 104.0 265 39.2
FAN16G0984 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.2e-20 103.6 267 40.4
FAN25G3808 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.2e-20 103.6 270 39.3
Gohir.D05G150000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 2.9e-20 103.2 271 35.8
Lalb_Chr20g0117821 Lupinus albus HOM05D007074 ORTHO05D008542 4.9e-20 102.4 286 32.5
Duzib235G1065 Durio zibethinus HOM05D007074 ORTHO05D008542 9.2e-19 98.2 263 35.0
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 3.0e-17 93.2 255 38.4
Psat1g191160 Pisum sativum HOM05D007074 ORTHO05D008542 3.0e-17 93.2 246 34.1
TPR.G26250 Trifolium pratense HOM05D007074 ORTHO05D008542 3.9e-17 92.8 269 34.6
Psat1g191080 Pisum sativum HOM05D007074 ORTHO05D008542 6.6e-17 92.0 266 32.7
Medtr2g019160 Medicago truncatula HOM05D007074 ORTHO05D008542 8.7e-17 91.7 253 34.4
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla HOM05D007074 ORTHO05D008542 1.9e-16 90.5 232 36.2
Dinv05217 Davidia involucrata HOM05D007074 ORTHO05D008542 4.3e-16 89.4 162 42.6
TWI73G0984 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 4.3e-16 89.4 208 39.4
Glyma.15G092900 Glycine max HOM05D007074 ORTHO05D008542 5.6e-16 89.0 247 34.4
Nn4g26598 Nelumbo nucifera HOM05D007074 ORTHO05D008542 1.6e-15 87.4 237 33.8
THA.LOC104814307 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 1.8e-14 84.0 275 30.2
Glyma.13G219300 Glycine max HOM05D007074 ORTHO05D008542 5.8e-13 79.0 249 32.1
MELO3C002739.2 Cucumis melo HOM05D007074 ORTHO05D008542 7.6e-13 78.6 220 35.5
Atru.chr10.1177 Acer truncatum HOM05D007074 ORTHO05D008542 1.7e-12 77.4 240 32.9
Gorai.010G167100 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.7e-12 77.4 245 30.2
Gohir.D06G143401 Gossypium hirsutum HOM05D007074 ORTHO05D008542 2.9e-12 76.6 204 32.8
Eucgr.E02421 Eucalyptus grandis HOM05D007074 ORTHO05D008542 4.9e-12 75.9 258 30.2
Lalb_Chr18g0055351 Lupinus albus HOM05D007074 ORTHO05D008542 4.9e-12 75.9 255 29.4
Ca_00533_v3 Cicer arietinum L. HOM05D007074 ORTHO05D008542 6.4e-12 75.5 219 32.9
arahy.Tifrunner.gnm1.ann1.4BL86F Arachis hypogaea HOM05D007074 ORTHO05D008542 8.4e-12 75.1 206 34.0
Gohir.A06G138601 Gossypium hirsutum HOM05D007074 ORTHO05D008542 8.4e-12 75.1 204 31.9
Sed0013579 Sechium edule HOM05D007074 ORTHO05D008542 1.1e-11 74.7 257 33.9
PGR031G2887 Punica granatum HOM05D007074 ORTHO05D008542 1.4e-11 74.3 239 33.5
PGSC0003DMG400021166 Solanum tuberosum HOM05D007074 ORTHO05D008542 1.4e-11 74.3 263 31.9
Oeu034132.1 Olea europaea HOM05D007074 ORTHO05D008542 2.4e-11 73.6 259 32.8
Nn3g20397 Nelumbo nucifera HOM05D007074 ORTHO05D008542 3.2e-11 73.2 250 30.8
Phvul.006G166000 Phaseolus vulgaris HOM05D007074 ORTHO05D008542 3.2e-11 73.2 255 31.4
A09p36350 Brassica napus HOM05D007074 ORTHO05D008542 4.2e-11 72.8 253 32.8
BraA09t39159Z Brassica rapa HOM05D007074 ORTHO05D008542 4.2e-11 72.8 253 32.8
A07p10060 Brassica napus HOM05D007074 ORTHO05D008542 5.4e-11 72.4 244 33.2
BraA07t28799Z Brassica rapa HOM05D007074 ORTHO05D008542 5.4e-11 72.4 244 33.2
BcaB03g13841 Brassica carinata HOM05D007074 ORTHO05D008542 1.6e-10 70.9 250 34.0
CsaV3_1G032390 Cucumis sativus L. HOM05D007074 ORTHO05D008542 1.6e-10 70.9 221 34.4
SHI24840 Sapria himalayana HOM05D042770 ORTHO05D008542 2.7e-10 70.1 100 48.0
SHI24843 Sapria himalayana HOM05D042770 ORTHO05D008542 2.7e-10 70.1 100 48.0
CARHR029240 Cardamine hirsuta HOM05D007074 ORTHO05D008542 3.5e-10 69.7 241 30.7
BcaC05g27044 Brassica carinata HOM05D007074 ORTHO05D008542 6.0e-10 68.9 243 34.6
C05p29030 Brassica napus HOM05D007074 ORTHO05D008542 6.0e-10 68.9 243 34.6
BolC5t31631H Brassica oleracea HOM05D007074 ORTHO05D008542 6.0e-10 68.9 243 34.6
Haze_05622 Corylus avellana HOM05D007074 ORTHO05D008542 6.0e-10 68.9 139 39.6
Gohir.D10G043000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 7.8e-10 68.6 259 29.0
A04p26510 Brassica napus HOM05D007074 ORTHO05D008542 1.3e-09 67.8 255 29.0
C04p63930 Brassica napus HOM05D007074 ORTHO05D008542 1.3e-09 67.8 255 29.0
FAN11G3402 Fragaria x ananassa HOM05D007074 ORTHO05D008542 1.3e-09 67.8 111 46.8
Gorai.011G045600 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.3e-09 67.8 266 27.8
Lj6g0018330 Lotus japonicus HOM05D007074 ORTHO05D008542 1.7e-09 67.4 260 28.5
Cfa000926 Carpinus fangiana HOM05D007074 ORTHO05D008542 2.3e-09 67.0 138 39.9
VMungo0540G2047 Vigna mungo HOM05D007074 ORTHO05D008542 3.0e-09 66.6 193 31.1
Migut.M00897 Erythranthe guttata HOM05D007074 ORTHO05D008542 6.6e-09 65.5 249 28.9
BraA04t18155Z Brassica rapa HOM05D007074 ORTHO05D008542 8.7e-09 65.1 260 29.6
Gohir.A10G042100 Gossypium hirsutum HOM05D007074 ORTHO05D008542 8.7e-09 65.1 261 27.2
BcaB07g32617 Brassica carinata HOM05D007074 ORTHO05D008542 1.5e-08 64.3 251 32.3
BolC4t27860H Brassica oleracea HOM05D007074 ORTHO05D008542 1.5e-08 64.3 255 28.2
SGA_v2.0_scaffold1478G53958 Striga asiatica HOM05D007074 ORTHO05D008542 1.5e-08 64.3 238 30.7
SGA_v2.0_scaffold1G00191 Striga asiatica HOM05D007074 ORTHO05D008542 1.5e-08 64.3 238 30.7
CsaV3_1G032290 Cucumis sativus L. HOM05D035155 ORTHO05D008542 3.3e-08 63.2 214 33.2
AT1G30190 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 4.3e-08 62.8 246 31.7
BcaB06g28786 Brassica carinata HOM05D007074 ORTHO05D008542 4.3e-08 62.8 248 27.8
ClCG03G006810 Citrullus lanatus HOM05D007074 ORTHO05D008542 4.3e-08 62.8 205 31.2
Thhalv10017803m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 4.3e-08 62.8 236 31.4
Sp1g26010 Schrenkiella parvula HOM05D007074 ORTHO05D008542 9.6e-08 61.6 243 28.8
AL1G44090 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 2.1e-07 60.5 234 30.8
AL700U10010 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 2.1e-07 60.5 234 30.8
Carub.0001s2842 Capsella rubella HOM05D007074 ORTHO05D008542 2.1e-07 60.5 250 31.6
Thhalv10008361m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 2.1e-07 60.5 279 30.5
Aa31LG10G6790 Aethionema arabicum HOM05D007074 ORTHO05D008542 2.8e-07 60.1 213 29.6
Sp4g16880 Schrenkiella parvula HOM05D007074 ORTHO05D008542 2.8e-07 60.1 257 30.0
Glyma.08G097500 Glycine max HOM05D007074 ORTHO05D008542 4.8e-07 59.3 246 28.0
MBI02_g24299_MAGBIO Magnolia biondii HOM05D007074 ORTHO05D008542 4.8e-07 59.3 253 30.8
DCAR_003900 Daucus carota HOM05D007074 ORTHO05D008542 6.2e-07 58.9 228 28.1
Sed0023002 Sechium edule HOM05D007074 ORTHO05D008542 8.1e-07 58.5 210 30.5
THA.LOC104820655 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 1.4e-06 57.8 251 28.3
A05p11040 Brassica napus HOM05D007074 ORTHO05D008542 3.1e-06 56.6 227 29.1
BcaB02g09522 Brassica carinata HOM05D007074 ORTHO05D008542 5.3e-06 55.8 235 28.9
BraA05t20049Z Brassica rapa HOM05D007074 ORTHO05D008542 9.0e-06 55.1 242 29.3


User provided reference genes

Program Settings