Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 2.6e-144 515.4 262 100.0
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 2.8e-98 362.5 261 72.4
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 4.3e-91 338.6 254 69.3
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 4.4e-67 258.8 255 56.1
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.6e-64 250.4 245 52.7
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 4.5e-64 248.8 245 51.8
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 2.2e-63 246.5 261 54.0
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 8.5e-63 244.6 250 52.8
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 2.3e-60 236.5 243 53.5
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 8.8e-60 234.6 251 50.6
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 2.0e-59 233.4 251 51.8
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 3.7e-58 229.2 239 51.9
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 4.8e-58 228.8 252 46.0
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 1.6e-56 223.8 235 51.9
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.0e-55 221.1 234 53.8
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 2.9e-55 219.5 189 62.4
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 5.0e-55 218.8 247 51.8
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 7.2e-54 214.9 248 49.2
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 3.6e-53 212.6 248 50.0
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 6.8e-52 208.4 242 49.2
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 2.0e-51 206.8 249 46.2
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.3e-50 204.1 233 50.6
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.4e-49 200.7 234 49.6
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 4.3e-46 189.1 250 46.4
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.1e-45 185.3 243 42.8
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 1.5e-43 180.6 273 38.8
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 2.6e-43 179.9 281 37.4
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 5.8e-43 178.7 225 48.9
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 2.9e-42 176.4 263 39.9
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 8.3e-42 174.9 174 55.2
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 1.9e-41 173.7 272 38.2
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 3.2e-41 172.9 276 37.0
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 3.2e-41 172.9 197 50.3
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 9.2e-41 171.4 261 36.8
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 9.2e-41 171.4 239 44.4
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 3.5e-40 169.5 235 43.0
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.5e-40 169.5 243 41.2
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.3e-39 167.5 243 40.7
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 5.0e-39 165.6 192 45.3
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 1.5e-38 164.1 273 34.4
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 1.9e-38 163.7 265 35.8
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.5e-38 163.3 243 39.9
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 4.3e-38 162.5 266 36.5
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 7.3e-38 161.8 247 38.9
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 1.6e-37 160.6 198 44.4
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 4.7e-37 159.1 274 35.0
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 4.7e-37 159.1 274 35.0
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.1e-36 157.9 213 44.6
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.5e-35 154.1 195 47.2
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 2.0e-35 153.7 237 41.4
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 6.4e-34 148.7 265 35.8
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 1.4e-33 147.5 200 42.0
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 1.4e-33 147.5 247 37.7
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 2.4e-33 146.7 244 39.8
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 7.1e-33 145.2 241 38.6
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 2.1e-32 143.7 201 42.3
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 4.6e-32 142.5 178 43.3
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.0e-31 141.4 126 58.7
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 2.3e-31 140.2 146 50.0
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 2.3e-31 140.2 276 34.1
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 5.1e-31 139.0 261 37.2
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 4.3e-30 136.0 126 55.6
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 6.2e-29 132.1 227 37.0
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 3.1e-28 129.8 133 52.6
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.6e-27 126.7 237 37.6
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 3.4e-27 126.3 198 39.9
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 5.8e-27 125.6 194 39.2
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 2.1e-24 117.1 254 34.6
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 3.5e-24 116.3 335 31.3
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 1.5e-22 110.9 202 39.1
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.1e-20 104.8 149 47.0
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 2.4e-20 103.6 250 34.4
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 8.9e-20 101.7 133 42.1
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.0e-19 100.5 235 33.2
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.0e-19 100.5 135 43.0
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.9e-18 95.9 223 32.7
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 1.2e-16 91.3 146 37.7
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 3.0e-15 86.7 163 37.4
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.1e-14 84.7 140 38.6
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 4.3e-14 82.8 244 25.8
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 7.3e-14 82.0 102 42.2
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 3.8e-10 69.7 143 34.3
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 1.4e-09 67.8 91 44.0
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 1.9e-09 67.4 103 39.8
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 9.3e-09 65.1 119 35.3
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 2.1e-08 63.9 158 34.2
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 2.7e-08 63.5 146 35.6
Prupe.4G080600 Prunus persica HOM05D008587 ORTHO05D010485 2.7e-08 63.5 145 37.2
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 4.6e-08 62.8 169 27.8
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 6.0e-08 62.4 144 31.9
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 7.8e-08 62.0 64 50.0
RcHm_v2.0_Chr5g0014151 Rosa chinensis HOM05D014465 ORTHO05D010485 1.7e-07 60.8 150 36.0
RcHm_v2.0_Chr5g0014161 Rosa chinensis HOM05D014465 ORTHO05D010485 2.3e-07 60.5 128 40.6
FvH4_3g05550 Fragaria vesca HOM05D014465 ORTHO05D010485 8.7e-07 58.5 143 37.1
FAN11G1722 Fragaria x ananassa HOM05D014465 ORTHO05D010485 8.7e-07 58.5 153 34.6
Sp4g16800 Schrenkiella parvula HOM05D008587 ORTHO05D010485 1.5e-06 57.8 116 36.2
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 1.9e-06 57.4 116 35.3
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 1.9e-06 57.4 107 38.3
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 2.5e-06 57.0 116 35.3
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 5.6e-06 55.8 115 34.8
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 5.6e-06 55.8 116 34.5
Cfa000945 Carpinus fangiana HOM05D008587 ORTHO05D010485 9.6e-06 55.1 89 37.1


User provided reference genes

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