Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 9.4e-218 760.0 409 100.0
Sabra04G0034300 Salix brachista HOM05D058718 ORTHO05D010890 4.8e-121 438.7 345 76.2
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 5.4e-64 249.2 431 41.5
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 2.2e-57 227.3 431 41.5
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 2.4e-27 127.5 439 31.2
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 5.8e-26 122.9 455 30.5
Atru.chr10.1733 Acer truncatum HOM05D009670 ORTHO05D010890 1.3e-20 105.1 395 29.4
Medtr2g015330 Medicago truncatula HOM05D009670 ORTHO05D010890 2.2e-17 94.4 443 27.5
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 1.9e-16 91.3 440 29.5
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 1.4e-14 85.1 424 27.8
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 2.3e-14 84.3 448 27.5
Gohir.D10G030600 Gossypium hirsutum HOM05D013066 ORTHO05D010890 4.3e-13 80.1 452 27.0
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 7.4e-13 79.3 418 26.3
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 7.4e-13 79.3 425 28.0
Lalb_Chr18g0059231 Lupinus albus HOM05D009670 ORTHO05D010890 1.3e-12 78.6 379 28.0
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.7e-12 78.2 416 28.4
Phvul.006G178900 Phaseolus vulgaris HOM05D009670 ORTHO05D010890 2.8e-12 77.4 407 28.7
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.8e-12 77.4 440 24.1
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 4.8e-12 76.6 460 27.6
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 6.3e-12 76.3 429 24.5
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 1.4e-11 75.1 431 27.4
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 1.4e-11 75.1 431 27.4
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.4e-11 75.1 385 28.1
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 3.1e-11 73.9 448 25.2
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 3.1e-11 73.9 400 25.8
VMungo0540G1521 Vigna mungo HOM05D009670 ORTHO05D010890 3.1e-11 73.9 427 28.1
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 4.1e-11 73.6 413 27.1
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 6.9e-11 72.8 446 26.5
TWI63G1542 Tripterygium wilfordii HOM05D013066 ORTHO05D010890 6.9e-11 72.8 214 36.0
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.5e-10 71.6 432 23.8
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 2.6e-10 70.9 387 26.6
Gorai.011G032500 Gossypium raimondii HOM05D013066 ORTHO05D010890 2.6e-10 70.9 466 26.4
Cpa.g.sc7.22 Carica papaya HOM05D013066 ORTHO05D010890 4.5e-10 70.1 422 28.2
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 5.9e-10 69.7 429 27.3
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.0e-09 68.9 421 29.9
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 1.0e-09 68.9 443 25.5
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.7e-09 68.2 194 27.8
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.9e-09 67.4 423 24.3
Gohir.A10G030000 Gossypium hirsutum HOM05D013066 ORTHO05D010890 5.0e-09 66.6 463 25.3
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 2.5e-08 64.3 410 25.1
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.5e-08 64.3 278 28.4
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 2.5e-08 64.3 429 27.5
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.2e-08 63.9 425 24.0
Lj1g0012311 Lotus japonicus HOM05D009670 ORTHO05D010890 3.2e-08 63.9 453 29.4
Cfa000566 Carpinus fangiana HOM05D038757 ORTHO05D010890 5.5e-08 63.2 394 25.4
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 5.5e-08 63.2 432 23.1
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 5.5e-08 63.2 423 25.8
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 7.2e-08 62.8 452 25.9
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 7.2e-08 62.8 429 27.0
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 9.4e-08 62.4 431 26.2
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 9.4e-08 62.4 415 27.2
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.1e-07 61.2 380 25.5
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.1e-07 61.2 460 25.0
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.7e-07 60.8 422 26.8
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 2.7e-07 60.8 463 25.7
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 2.7e-07 60.8 449 25.4
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 2.7e-07 60.8 421 24.9
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 3.6e-07 60.5 302 26.2
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 4.7e-07 60.1 447 25.3
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.7e-07 60.1 435 24.1
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 6.1e-07 59.7 433 25.2
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 1.0e-06 58.9 336 24.4
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.4e-06 58.5 423 25.3
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 1.4e-06 58.5 407 26.0
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.3e-06 57.8 196 28.6
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 3.0e-06 57.4 290 24.8
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.0e-06 57.4 196 31.1
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 3.9e-06 57.0 466 23.6
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 5.1e-06 56.6 450 25.8
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 5.1e-06 56.6 193 28.5
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 6.7e-06 56.2 444 22.7
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 8.8e-06 55.8 462 24.7
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 8.8e-06 55.8 460 25.7
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 8.8e-06 55.8 418 26.3
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 8.8e-06 55.8 424 23.6


User provided reference genes

Program Settings