Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G051201 Populus trichocarpa HOM05D006125 ORTHO05D007404 3.0e-44 181.4 88 100.0
Sabra03G0134100 Salix brachista HOM05D006125 ORTHO05D007404 1.3e-10 69.7 53 66.0
Potri.003G183501 Populus trichocarpa HOM05D006125 ORTHO05D007404 4.8e-10 67.8 53 66.0
Potri.001G043300 Populus trichocarpa HOM05D006125 ORTHO05D007404 4.1e-09 64.7 53 62.3
Sabra01G0029800 Salix brachista HOM05D006125 ORTHO05D007404 2.6e-08 62.0 77 46.8
THA.LOC104808176 Tarenaya hassleriana HOM05D006125 ORTHO05D007404 2.6e-08 62.0 55 54.5
Thhalv10009235m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 1.0e-07 60.1 56 48.2
AT1G80890 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 1.7e-07 59.3 51 47.1
Thhalv10019388m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 1.7e-07 59.3 54 46.3
BcaC08g47537 Brassica carinata HOM05D006125 ORTHO05D007404 2.2e-07 58.9 56 44.6
A07p44800 Brassica napus HOM05D006125 ORTHO05D007404 2.2e-07 58.9 56 44.6
C06p53620 Brassica napus HOM05D006125 ORTHO05D007404 2.2e-07 58.9 56 44.6
BolC6t40378H Brassica oleracea HOM05D006125 ORTHO05D007404 2.2e-07 58.9 56 44.6
Hma1.2p1_0329F.1_g127170 Hydrangea macrophylla HOM05D006125 ORTHO05D007404 2.2e-07 58.9 51 54.9
BraA07t31987Z Brassica rapa HOM05D006125 ORTHO05D007404 2.9e-07 58.5 57 43.9
BraA07t30336Z Brassica rapa HOM05D006125 ORTHO05D007404 3.8e-07 58.2 55 45.5
Manes.04G101402 Manihot esculenta HOM05D006125 ORTHO05D007404 5.0e-07 57.8 51 54.9
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 6.5e-07 57.4 58 43.1
BcaC08g45345 Brassica carinata HOM05D006125 ORTHO05D007404 6.5e-07 57.4 57 43.9
C06p29590 Brassica napus HOM05D006125 ORTHO05D007404 6.5e-07 57.4 57 43.9
BolC6t38124H Brassica oleracea HOM05D006125 ORTHO05D007404 6.5e-07 57.4 57 43.9
ECA246G3825 Erigeron canadensis HOM05D006125 ORTHO05D007404 6.5e-07 57.4 51 52.9
Manes.11G068700 Manihot esculenta HOM05D006125 ORTHO05D007404 6.5e-07 57.4 59 49.2
A07p26910 Brassica napus HOM05D006125 ORTHO05D007404 8.5e-07 57.0 56 44.6
Dinv23278 Davidia involucrata HOM05D006125 ORTHO05D007404 8.5e-07 57.0 52 51.9
BcaB02g08714 Brassica carinata HOM05D006125 ORTHO05D007404 1.1e-06 56.6 57 45.6
CARHR073580 Cardamine hirsuta HOM05D006125 ORTHO05D007404 1.1e-06 56.6 55 43.6
Aa31LG7G580 Aethionema arabicum HOM05D006125 ORTHO05D007404 1.4e-06 56.2 37 59.5
HanXRQChr05g0153751 Helianthus annuus HOM05D006125 ORTHO05D007404 1.4e-06 56.2 51 49.0
Actinidia25476 Actinidia chinensis HOM05D006125 ORTHO05D007404 1.9e-06 55.8 52 53.8
Cpa.g.sc10.63 Carica papaya HOM05D006125 ORTHO05D007404 1.9e-06 55.8 54 53.7
Sp5g34850 Schrenkiella parvula HOM05D006125 ORTHO05D007404 1.9e-06 55.8 37 54.1
Ciclev10026865m.g Citrus clementina HOM05D006125 ORTHO05D007404 2.5e-06 55.5 55 49.1
Oeu009806.1 Olea europaea HOM05D006125 ORTHO05D007404 2.5e-06 55.5 55 47.3
AL2G40490 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 3.2e-06 55.1 51 45.1
DCAR_021146 Daucus carota HOM05D006125 ORTHO05D007404 3.2e-06 55.1 51 51.0
Aa31LG4G1200 Aethionema arabicum HOM05D006125 ORTHO05D007404 4.2e-06 54.7 37 54.1
CiPaw.09G167300 Carya illinoinensis HOM05D006125 ORTHO05D007404 4.2e-06 54.7 54 48.1
Sp1g14310 Schrenkiella parvula HOM05D006125 ORTHO05D007404 4.2e-06 54.7 38 50.0
Dinv21417 Davidia involucrata HOM05D006125 ORTHO05D007404 5.5e-06 54.3 52 51.9
Eucgr.J03118 Eucalyptus grandis HOM05D006125 ORTHO05D007404 5.5e-06 54.3 54 50.0
Carub.0001s1580 Capsella rubella HOM05D006125 ORTHO05D007404 7.2e-06 53.9 57 42.1
Lalb_Chr04g0264571 Lupinus albus HOM05D006125 ORTHO05D007404 7.2e-06 53.9 41 58.5
Actinidia18251 Actinidia chinensis HOM05D006125 ORTHO05D007404 9.4e-06 53.5 55 47.3
AT1G16000 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 9.4e-06 53.5 57 40.4
Nitab4.5_0009867g0040 Nicotiana tabacum HOM05D006125 ORTHO05D007404 9.4e-06 53.5 50 48.0
RcHm_v2.0_Chr2g0132751 Rosa chinensis HOM05D006125 ORTHO05D007404 9.4e-06 53.5 51 52.9


User provided reference genes

Program Settings