Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.0e-110 401.4 286 100.0
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 6.4e-72 275.0 290 65.2
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.9e-71 273.5 288 67.0
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 4.6e-70 268.9 314 62.7
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 3.2e-31 139.8 240 42.9
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 6.1e-30 135.6 312 44.6
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.2e-25 121.3 266 44.4
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 2.7e-25 120.2 280 46.4
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.7e-25 120.2 235 41.3
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.9e-25 119.0 235 40.4
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 5.9e-25 119.0 316 34.8
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.7e-24 117.5 250 43.6
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.8e-21 107.5 269 39.4
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 6.8e-21 105.5 286 40.2
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 4.8e-19 99.4 253 37.5
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 8.3e-19 98.6 247 47.4
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.4e-18 97.8 294 40.8
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 9.1e-18 95.1 256 43.4
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 1.2e-17 94.7 278 36.3
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.6e-17 94.4 257 39.3
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 2.0e-17 94.0 220 37.3
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 7.7e-17 92.0 261 43.3
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 2.2e-16 90.5 135 45.2
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 5.0e-16 89.4 235 47.2
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.0e-16 89.4 231 41.6
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.0e-16 89.4 231 41.6
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.0e-16 89.4 294 35.7
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 8.5e-16 88.6 317 32.5
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.1e-15 88.2 255 38.0
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.9e-15 87.4 140 45.7
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.9e-15 87.4 140 45.7
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 4.2e-15 86.3 253 39.1
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 5.5e-15 85.9 263 39.2
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.2e-14 84.7 218 33.9
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 2.8e-14 83.6 250 38.4
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.6e-14 83.2 129 44.2
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 4.7e-14 82.8 100 55.0
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 1.0e-13 81.6 114 49.1
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.4e-13 81.3 317 30.3
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.8e-13 80.9 103 49.5
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 4.0e-13 79.7 243 32.5
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 6.8e-13 79.0 251 37.5
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 8.8e-13 78.6 133 44.4
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 8.8e-13 78.6 224 32.1
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 5.7e-12 75.9 250 31.2
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 5.7e-12 75.9 97 47.4
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.7e-12 75.9 97 47.4
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 7.5e-12 75.5 241 44.0
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 9.8e-12 75.1 240 38.3
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 9.8e-12 75.1 109 46.8
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 2.2e-11 73.9 267 28.8
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 2.2e-11 73.9 298 28.2
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 4.9e-11 72.8 117 42.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 4.9e-11 72.8 93 48.4
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 4.9e-11 72.8 133 40.6
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 4.9e-11 72.8 107 46.7
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 4.9e-11 72.8 379 28.2
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 6.3e-11 72.4 254 35.8
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.1e-10 71.6 343 35.3
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 1.4e-10 71.2 230 40.9
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.8e-10 70.9 220 42.3
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.8e-10 70.9 230 30.0
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 2.4e-10 70.5 320 31.6
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 3.1e-10 70.1 240 31.2
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.1e-10 70.1 94 45.7
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 4.1e-10 69.7 274 35.0
Aqoxy4G00632 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 7.0e-10 68.9 334 36.8
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-09 68.2 215 35.3
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 1.6e-09 67.8 227 44.1
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 1.6e-09 67.8 262 31.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 3.5e-09 66.6 270 33.7
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.5e-09 66.6 94 47.9
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.5e-09 66.2 269 36.4
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.5e-09 66.2 269 36.4
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 5.9e-09 65.9 166 35.5
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 5.9e-09 65.9 336 29.8
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 7.8e-09 65.5 279 31.5
CARHR128000 Cardamine hirsuta HOM05D009159 ORTHO05D005331 1.3e-08 64.7 238 28.6
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 2.9e-08 63.5 212 31.1
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 3.8e-08 63.2 169 34.3
PSO210G1528 Papaver somniferum HOM05D025247 ORTHO05D050219 5.0e-08 62.8 257 30.7
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 8.6e-08 62.0 106 45.3
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 8.6e-08 62.0 281 34.2
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 8.6e-08 62.0 239 34.3
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 1.1e-07 61.6 328 29.6
Sc06g0009300 Simmondsia chinensis HOM05D025247 ORTHO05D026483 1.1e-07 61.6 223 32.3
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 1.5e-07 61.2 217 32.7
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 1.5e-07 61.2 217 32.7
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 1.5e-07 61.2 248 27.0
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-07 61.2 112 42.0
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-07 61.2 100 42.0
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-07 61.2 115 45.2
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.9e-07 60.8 222 29.3
Sp4g16260 Schrenkiella parvula HOM05D009159 ORTHO05D005331 1.9e-07 60.8 236 27.5
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.5e-07 60.5 133 35.3
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 3.3e-07 60.1 235 28.5
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 4.3e-07 59.7 239 30.1
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 4.3e-07 59.7 231 37.7
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.3e-07 59.7 126 41.3
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.6e-07 59.3 77 45.5
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 9.5e-07 58.5 222 26.1
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 1.2e-06 58.2 211 28.9
Carub.0004s1555 Capsella rubella HOM05D009159 ORTHO05D005331 1.2e-06 58.2 259 32.4
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 1.6e-06 57.8 211 28.9
Sp1g24680 Schrenkiella parvula HOM05D009159 ORTHO05D005331 1.6e-06 57.8 233 30.9
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.1e-06 57.4 115 42.6
AT2G33850 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 3.6e-06 56.6 241 34.9
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.6e-06 56.6 121 35.5
BcaB03g13928 Brassica carinata HOM05D009159 ORTHO05D005331 4.7e-06 56.2 242 32.2
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.7e-06 56.2 126 41.3
THA.LOC104814229 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 4.7e-06 56.2 288 30.2
Atru.chr10.1802 Acer truncatum HOM05D007160 ORTHO05D005331 6.1e-06 55.8 275 35.6
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 6.1e-06 55.8 134 38.1


User provided reference genes

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