Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 3.5e-71 271.6 141 100.0
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 7.8e-63 243.8 141 89.4
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 2.5e-61 238.8 137 89.8
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 4.8e-60 234.6 141 85.1
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 3.9e-38 161.8 144 63.2
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.9e-37 159.5 138 68.1
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 3.1e-35 152.1 145 59.3
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 1.3e-33 146.7 145 57.9
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 2.2e-33 146.0 135 60.7
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 3.8e-33 145.2 144 60.4
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 6.5e-33 144.4 139 58.3
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.1e-32 143.7 142 58.5
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 9.3e-32 140.6 145 57.2
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 6.1e-31 137.9 145 56.6
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 7.9e-31 137.5 151 55.6
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 1.0e-30 137.1 144 55.6
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 3.0e-30 135.6 141 52.5
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.9e-29 132.9 141 52.5
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.4e-29 131.0 147 56.5
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 3.7e-28 128.6 136 51.5
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 4.8e-28 128.3 125 59.2
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 6.3e-28 127.9 151 55.0
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 8.2e-28 127.5 143 53.1
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.4e-27 125.9 137 54.0
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 3.1e-27 125.6 144 50.7
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 5.3e-27 124.8 146 52.1
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 9.1e-27 124.0 153 53.6
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.2e-26 123.6 133 54.1
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.5e-26 123.2 146 54.1
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 2.0e-26 122.9 137 52.6
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 3.4e-26 122.1 132 56.1
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 4.5e-26 121.7 145 50.3
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.5e-26 121.7 148 52.0
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 5.9e-26 121.3 145 53.1
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 7.7e-26 120.9 143 50.3
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.0e-25 120.6 150 52.0
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.0e-25 120.6 150 52.0
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 1.7e-25 119.8 143 51.0
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 2.2e-25 119.4 136 55.1
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 2.9e-25 119.0 145 51.0
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 3.8e-25 118.6 149 49.0
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 3.8e-25 118.6 144 49.3
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 5.0e-25 118.2 144 50.7
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 6.5e-25 117.9 141 50.4
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 1.1e-24 117.1 145 49.0
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 1.4e-24 116.7 145 51.0
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 1.9e-24 116.3 148 52.7
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 4.2e-24 115.2 141 47.5
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 4.2e-24 115.2 144 50.7
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 5.5e-24 114.8 144 49.3
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 7.2e-24 114.4 146 50.7
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.2e-23 113.6 142 49.3
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 2.1e-23 112.8 144 51.4
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 2.1e-23 112.8 145 47.6
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 2.1e-23 112.8 144 49.3
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 4.6e-23 111.7 146 51.4
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 1.0e-22 110.5 146 51.4
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 1.0e-22 110.5 146 50.7
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 1.0e-22 110.5 136 50.0
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.4e-22 110.2 141 50.4
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 1.4e-22 110.2 142 47.9
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 5.1e-22 108.2 143 49.7
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 6.7e-22 107.8 149 49.0
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.1e-21 107.1 149 49.7
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 1.5e-21 106.7 145 48.3
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.6e-21 105.9 149 49.7
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 4.4e-21 105.1 142 45.8
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 5.7e-21 104.8 121 52.9
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 9.7e-21 104.0 129 51.9
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 4.8e-20 101.7 151 48.3
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 6.3e-20 101.3 147 45.6
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 1.1e-19 100.5 140 46.4
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 1.4e-19 100.1 147 45.6
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.5e-18 96.7 129 49.6
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 3.4e-18 95.5 141 43.3
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 3.4e-18 95.5 142 44.4
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 3.8e-17 92.0 125 46.4
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 6.5e-17 91.3 139 45.3
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 8.5e-17 90.9 144 45.1
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 8.5e-17 90.9 127 48.0
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.4e-16 90.1 141 44.0
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 1.9e-16 89.7 144 44.4
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 2.7e-15 85.9 127 46.5
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 1.8e-14 83.2 83 59.0
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 1.8e-14 83.2 81 56.8
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 3.9e-14 82.0 114 46.5
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 8.8e-14 80.9 138 40.6
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 9.7e-13 77.4 127 43.3
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 2.2e-12 76.3 129 42.6
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 4.8e-12 75.1 131 42.7
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 4.5e-10 68.6 88 45.5
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 3.8e-09 65.5 87 48.3
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 6.5e-09 64.7 68 58.8
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 6.5e-09 64.7 68 52.9
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 3.2e-08 62.4 101 40.6
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 5.5e-08 61.6 124 40.3
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 1.6e-07 60.1 138 36.2
Lsat_1_v5_gn_9_23221 Lactuca sativa HOM05D003527 ORTHO05D004099 3.6e-07 58.9 121 33.9
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 1.0e-06 57.4 72 50.0
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 1.0e-06 57.4 71 49.3
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 1.8e-06 56.6 71 45.1
DCAR_005975 Daucus carota HOM05D003527 ORTHO05D004099 2.3e-06 56.2 68 48.5
GSVIVG01034186001 Vitis vinifera HOM05D003527 ORTHO05D004099 2.3e-06 56.2 70 44.3
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 3.0e-06 55.8 49 65.3
Peaxi162Scf00165g01520 Petunia axillaris HOM05D003527 ORTHO05D004099 4.0e-06 55.5 68 48.5
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 5.2e-06 55.1 71 46.5
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 5.2e-06 55.1 71 46.5
Hma1.2p1_1513F.1_g288070 Hydrangea macrophylla HOM05D003527 ORTHO05D004099 6.7e-06 54.7 69 47.8
HanXRQChr05g0134511 Helianthus annuus HOM05D003527 ORTHO05D004099 8.8e-06 54.3 68 41.2
HanXRQChr08g0234711 Helianthus annuus HOM05D003527 ORTHO05D004099 8.8e-06 54.3 65 50.8


User provided reference genes

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