Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 2.4e-51 205.3 110 100.0
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 5.0e-41 171.0 162 66.0
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 7.5e-37 157.1 99 80.8
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 8.3e-36 153.7 108 72.2
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 1.1e-35 153.3 94 83.0
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 1.4e-35 152.9 93 86.0
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.1e-35 151.4 108 76.9
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.2e-34 149.8 104 76.9
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.1e-34 149.1 110 71.8
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 3.5e-34 148.3 110 71.8
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.3e-33 146.4 104 75.0
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.3e-33 145.6 108 69.4
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 3.9e-33 144.8 100 74.0
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 3.9e-33 144.8 102 73.5
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.9e-33 144.8 102 73.5
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 3.9e-33 144.8 102 73.5
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 5.0e-33 144.4 96 74.0
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 8.6e-33 143.7 96 72.9
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 1.1e-32 143.3 99 76.8
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.5e-32 142.9 100 74.0
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.5e-32 142.9 110 69.1
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 1.5e-32 142.9 100 75.0
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 3.3e-32 141.7 108 68.5
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 4.3e-32 141.4 101 72.3
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 5.6e-32 141.0 99 77.8
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 7.3e-32 140.6 98 74.5
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 7.3e-32 140.6 96 75.0
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 9.5e-32 140.2 94 77.7
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 9.5e-32 140.2 100 74.0
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.2e-31 139.8 101 75.2
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.2e-31 139.8 95 74.7
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 2.1e-31 139.0 102 72.5
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 2.1e-31 139.0 102 75.5
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 4.7e-31 137.9 95 75.8
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 6.2e-31 137.5 90 81.1
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 8.1e-31 137.1 101 66.3
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.1e-30 136.7 110 67.3
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.4e-30 136.3 90 80.0
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.8e-30 136.0 100 72.0
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 2.3e-30 135.6 99 66.7
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 4.0e-30 134.8 101 65.3
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 4.0e-30 134.8 93 75.3
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 4.0e-30 134.8 93 75.3
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 4.0e-30 134.8 100 69.0
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 5.2e-30 134.4 106 66.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 6.8e-30 134.0 102 70.6
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.0e-29 132.5 104 65.4
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 2.6e-29 132.1 101 66.3
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 2.6e-29 132.1 103 67.0
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 3.4e-29 131.7 102 70.6
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.4e-29 131.7 109 62.4
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 3.4e-29 131.7 101 65.3
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 4.4e-29 131.3 103 64.1
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 4.4e-29 131.3 101 70.3
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.3e-28 129.8 100 66.0
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.3e-28 129.8 96 75.0
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.3e-28 129.8 108 66.7
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.7e-28 129.4 99 64.6
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.7e-28 129.4 99 64.6
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.7e-28 129.4 94 70.2
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.7e-28 129.4 100 69.0
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.2e-28 129.0 95 71.6
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 2.9e-28 128.6 103 63.1
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 3.7e-28 128.3 99 63.6
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 3.7e-28 128.3 110 65.5
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 3.7e-28 128.3 106 62.3
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 4.9e-28 127.9 106 62.3
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 6.4e-28 127.5 97 68.0
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 8.3e-28 127.1 101 65.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 8.3e-28 127.1 107 61.7
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.4e-27 126.3 104 65.4
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.4e-27 126.3 99 62.6
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.4e-27 126.3 99 68.7
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 3.2e-27 125.2 98 67.3
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.2e-26 123.2 111 60.4
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.6e-26 122.9 95 67.4
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.5e-26 121.7 109 59.6
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 3.5e-26 121.7 108 62.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 6.0e-26 120.9 100 64.0
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.7e-25 119.4 94 67.0
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 8.6e-25 117.1 129 51.2
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 8.6e-25 117.1 117 53.8
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 3.3e-24 115.2 80 75.0
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 1.6e-23 112.8 70 81.4
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 3.6e-23 111.7 105 56.2
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.4e-22 109.8 108 54.6
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 7.6e-21 104.0 81 64.2
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 7.6e-21 104.0 73 75.3
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 7.6e-21 104.0 110 54.5
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.2e-20 102.4 99 53.5
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 6.4e-20 100.9 79 67.1
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 8.4e-20 100.5 101 53.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 1.9e-19 99.4 92 59.8
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 2.4e-19 99.0 100 54.0
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 4.1e-19 98.2 77 68.8
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 9.2e-19 97.1 97 54.6
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 3.5e-18 95.1 59 81.4
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 3.0e-17 92.0 62 77.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 4.3e-16 88.2 109 47.7
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 4.7e-15 84.7 109 45.0
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 8.1e-15 84.0 105 43.8
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.4e-11 73.2 85 49.4
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 3.9e-09 65.1 99 42.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 3.6e-07 58.5 65 47.7
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.0e-06 55.1 48 56.2


User provided reference genes

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