Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 8.3e-87 323.9 196 100.0
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 6.0e-69 264.6 170 84.7
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 3.0e-68 262.3 170 84.1
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 2.4e-57 226.1 176 73.3
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 9.9e-40 167.5 186 55.4
Atru.chr10.2001 Acer truncatum HOM05D006902 ORTHO05D008468 4.9e-39 165.2 172 59.9
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 4.3e-35 152.1 197 50.3
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 2.1e-34 149.8 173 56.6
Nn8g40519 Nelumbo nucifera HOM05D006902 ORTHO05D008468 2.8e-34 149.4 175 55.4
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 3.7e-34 149.1 175 54.9
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 1.4e-33 147.1 168 55.4
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 1.5e-32 143.7 146 57.5
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 1.5e-32 143.7 173 54.9
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 2.0e-32 143.3 175 54.9
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 5.8e-32 141.7 158 57.0
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 1.3e-31 140.6 173 54.3
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 1.7e-31 140.2 174 50.0
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 1.7e-31 140.2 174 51.7
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 2.2e-31 139.8 169 51.5
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 2.2e-31 139.8 171 52.0
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 2.9e-31 139.4 168 52.4
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 4.9e-31 138.7 173 53.2
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 6.4e-31 138.3 177 51.4
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 1.9e-30 136.7 176 51.7
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 2.5e-30 136.3 169 50.9
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 3.2e-30 136.0 176 53.4
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 3.2e-30 136.0 171 50.9
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 5.5e-30 135.2 165 52.1
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 7.1e-30 134.8 180 50.0
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 9.3e-30 134.4 174 51.7
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 9.3e-30 134.4 177 50.8
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 2.7e-29 132.9 177 49.7
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 4.3e-27 125.6 175 46.9
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 9.6e-27 124.4 183 45.9
ATR0580G203 Amborella trichopoda HOM05D006902 ORTHO05D008468 2.4e-25 119.8 169 49.1
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 1.5e-24 117.1 162 50.0
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 4.5e-24 115.5 196 43.4
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 1.0e-23 114.4 162 49.4
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 4.9e-23 112.1 197 41.1
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 8.4e-23 111.3 188 41.0
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 8.4e-23 111.3 188 41.0
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 4.2e-22 109.0 165 46.1
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea HOM05D006902 ORTHO05D008468 2.7e-21 106.3 161 42.9
Eucgr.D00710 Eucalyptus grandis HOM05D006902 ORTHO05D008468 3.5e-21 105.9 171 43.9
Eucgr.L03594 Eucalyptus grandis HOM05D006902 ORTHO05D008468 4.6e-21 105.5 171 43.9
FAN25G0692 Fragaria x ananassa HOM05D006902 ORTHO05D008468 6.0e-21 105.1 138 52.9
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 6.0e-21 105.1 173 43.9
vmacro15868 Vaccinium macrocarpon HOM05D006902 ORTHO05D008468 2.3e-20 103.2 241 37.8
QL05p081948 Quercus lobata HOM05D006902 ORTHO05D008468 3.9e-20 102.4 174 43.1
Aqoxy7G03119 Aquilegia oxysepala HOM05D006902 ORTHO05D008468 8.7e-20 101.3 166 44.6
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea HOM05D006902 ORTHO05D008468 2.5e-19 99.8 162 41.4
ECA234G0685 Erigeron canadensis HOM05D006902 ORTHO05D008468 3.3e-19 99.4 142 48.6
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 3.3e-19 99.4 161 46.6
Peaxi162Scf00371g01024 Petunia axillaris HOM05D006902 ORTHO05D008468 1.3e-18 97.4 172 45.3
VMungo0251G2276 Vigna mungo HOM05D006902 ORTHO05D008468 1.3e-18 97.4 152 42.1
Lj4g0003242 Lotus japonicus HOM05D006902 ORTHO05D008468 2.8e-18 96.3 160 41.2
THA.LOC104809549 Tarenaya hassleriana HOM05D006902 ORTHO05D008468 2.8e-18 96.3 159 44.0
AT1G11240 Arabidopsis thaliana HOM05D006902 ORTHO05D008468 3.7e-18 95.9 172 42.4
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 4.8e-18 95.5 181 39.8
Sp1g09900 Schrenkiella parvula HOM05D006902 ORTHO05D008468 4.8e-18 95.5 172 41.9
Glyma.07G190800 Glycine max HOM05D006902 ORTHO05D008468 6.3e-18 95.1 152 44.1
Cpa.g.sc27.115 Carica papaya HOM05D006902 ORTHO05D008468 8.2e-18 94.7 102 59.8
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 2.4e-17 93.2 169 39.6
Phvul.002G222700 Phaseolus vulgaris HOM05D006902 ORTHO05D008468 3.1e-17 92.8 152 41.4
Lalb_Chr16g0383411 Lupinus albus HOM05D006902 ORTHO05D008468 6.9e-17 91.7 163 42.3
TPR.G32415 Trifolium pratense HOM05D006902 ORTHO05D008468 9.0e-17 91.3 170 37.6
Medtr4g090910 Medicago truncatula HOM05D006902 ORTHO05D008468 1.2e-16 90.9 165 40.0
AL1G22260 Arabidopsis lyrata HOM05D006902 ORTHO05D008468 2.6e-16 89.7 180 40.6
FAN11G0740 Fragaria x ananassa HOM05D000306 ORTHO05D000410 3.4e-16 89.4 103 52.4
PGR004G1238 Punica granatum HOM05D006902 ORTHO05D008468 3.4e-16 89.4 174 42.0
BolC5t29692H Brassica oleracea HOM05D006902 ORTHO05D008468 7.7e-16 88.2 169 39.1
Glyma.08G058500 Glycine max HOM05D006902 ORTHO05D008468 7.7e-16 88.2 153 42.5
SGA_v2.0_scaffold159G37666 Striga asiatica HOM05D006902 ORTHO05D008468 1.3e-15 87.4 176 40.9
C05p09500 Brassica napus HOM05D006902 ORTHO05D008468 1.7e-15 87.0 169 39.1
Carub.0001s1082 Capsella rubella HOM05D006902 ORTHO05D008468 3.8e-15 85.9 193 37.8
BcaNung04470 Brassica carinata HOM05D006902 ORTHO05D008468 6.5e-15 85.1 168 38.1
COL.COLO4_31574 Corchorus olitorius HOM05D000306 ORTHO05D000410 6.5e-15 85.1 169 41.4
Aa31LG1G3550 Aethionema arabicum HOM05D006902 ORTHO05D008468 2.5e-14 83.2 156 40.4
CARHR011470 Cardamine hirsuta HOM05D006902 ORTHO05D008468 4.2e-14 82.4 167 40.1
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 4.2e-14 82.4 158 43.0
A06p07900 Brassica napus HOM05D006902 ORTHO05D008468 5.5e-14 82.0 164 41.5
BraA06t23989Z Brassica rapa HOM05D006902 ORTHO05D008468 5.5e-14 82.0 164 41.5
Os03g0353500 Oryza sativa ssp. japonica HOM05D006902 ORTHO05D008468 5.5e-14 82.0 201 38.3
Ca_18489_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 9.4e-14 81.3 156 37.8
Ca_29542_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 9.4e-14 81.3 156 37.8
Ah.14g088940 Amaranthus hybridus HOM05D006902 ORTHO05D008468 4.6e-13 79.0 169 38.5
FAN23G2525 Fragaria x ananassa HOM05D006902 ORTHO05D008468 7.9e-13 78.2 101 51.5
Thhalv10008794m.g Eutrema salsugineum HOM05D006902 ORTHO05D008468 1.0e-12 77.8 187 37.4
EL10Ac8g20614 Beta vulgaris HOM05D006902 ORTHO05D008468 1.4e-12 77.4 157 40.1
FAN19G2227 Fragaria x ananassa HOM05D006902 ORTHO05D008468 2.3e-12 76.6 101 49.5
SEGI_26187 Sequoiadendron giganteum HOM05D006902 ORTHO05D008468 2.3e-12 76.6 169 36.7
FAN26G1405 Fragaria x ananassa HOM05D006902 ORTHO05D008468 6.7e-12 75.1 101 49.5
Hund23624 Selenicereus undatus HOM05D006902 ORTHO05D008468 1.1e-11 74.3 107 43.9
MD05G1325000 Malus domestica HOM05D006902 ORTHO05D008468 5.7e-11 72.0 73 57.5
Psat7g109600 Pisum sativum HOM05D006902 ORTHO05D008468 5.7e-11 72.0 160 36.9
BolC8t49055H Brassica oleracea HOM05D006902 ORTHO05D008468 9.7e-11 71.2 171 38.6
TAR625G0841 Trochodendron aralioides HOM05D006902 ORTHO05D008468 9.7e-11 71.2 97 49.5
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.3e-10 70.9 178 37.1
Pp3c20_8900 Physcomitrium patens HOM05D006902 ORTHO05D008468 4.8e-10 68.9 132 39.4
BcaC05g24999 Brassica carinata HOM05D006902 ORTHO05D008468 1.4e-09 67.4 102 44.1
HPP92_006711 Vanilla planifolia HOM05D006902 ORTHO05D008468 1.4e-09 67.4 152 37.5
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 1.8e-09 67.0 171 34.5
unitig_8.g3353 Utricularia gibba HOM05D006902 ORTHO05D008468 5.3e-09 65.5 124 41.9
Zm00001eb394590 Zea mays HOM05D006902 ORTHO05D008468 1.2e-08 64.3 134 44.0
Cpa.g.c36644 Carica papaya HOM05D006902 ORTHO05D008468 2.0e-08 63.5 69 55.1
BcaC05g24986 Brassica carinata HOM05D006902 ORTHO05D008468 7.7e-08 61.6 107 43.9
BcaC07g38645 Brassica carinata HOM05D006902 ORTHO05D008468 1.0e-07 61.2 170 36.5
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.0e-07 61.2 170 37.6
Nitab4.5_0003223g0040 Nicotiana tabacum HOM05D006902 ORTHO05D008468 2.9e-07 59.7 106 45.3
Cre03.g183500 Chlamydomonas reinhardtii HOM05D006902 ORTHO05D008468 1.9e-06 57.0 121 39.7


User provided reference genes

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