Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 4.9e-73 277.7 140 100.0
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 4.4e-66 254.6 140 90.7
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.9e-61 239.2 140 85.0
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 4.7e-52 208.0 145 76.6
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 6.8e-51 204.1 144 75.7
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.3e-49 199.9 144 73.6
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 3.2e-48 195.3 144 72.9
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 7.1e-48 194.1 145 69.0
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 9.2e-48 193.7 137 71.5
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.2e-47 193.4 144 69.4
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.9e-45 186.0 145 69.7
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 5.6e-45 184.5 141 69.5
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 7.3e-45 184.1 146 68.5
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.6e-44 183.0 137 71.5
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 3.6e-44 181.8 137 70.8
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 4.7e-44 181.4 139 65.5
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 8.1e-44 180.6 147 66.0
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.4e-43 179.9 137 70.1
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.8e-43 179.5 147 66.0
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 2.0e-42 176.0 132 70.5
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.4e-42 175.3 140 67.1
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 4.4e-42 174.9 149 64.4
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.2e-41 172.6 146 65.1
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.9e-41 172.2 144 66.7
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.9e-41 172.2 143 65.7
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 6.4e-41 171.0 147 63.9
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.1e-40 170.2 131 66.4
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.4e-40 169.9 109 78.9
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 1.9e-40 169.5 142 63.4
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.2e-40 168.3 147 65.3
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 7.1e-40 167.5 146 63.0
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.6e-39 166.4 147 64.6
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.1e-39 166.0 115 72.2
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 3.5e-39 165.2 142 62.0
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 4.6e-39 164.9 143 65.7
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 6.0e-39 164.5 142 64.1
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 7.8e-39 164.1 136 64.0
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 1.3e-38 163.3 115 72.2
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.7e-38 162.9 109 74.3
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.3e-38 162.5 107 76.6
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.9e-38 161.8 137 64.2
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 5.1e-38 161.4 137 62.8
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 5.1e-38 161.4 136 61.8
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 8.7e-38 160.6 111 73.9
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 8.7e-38 160.6 111 73.9
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 8.7e-38 160.6 111 73.9
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 8.7e-38 160.6 143 62.2
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 1.5e-37 159.8 105 76.2
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.9e-37 159.5 147 58.5
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 5.6e-37 157.9 123 65.0
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 7.3e-37 157.5 111 73.0
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 9.6e-37 157.1 102 78.4
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 9.6e-37 157.1 153 60.1
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 9.6e-37 157.1 143 60.8
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-36 156.8 152 57.9
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-36 156.8 147 59.9
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.3e-36 156.8 139 62.6
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 1.6e-36 156.4 138 63.0
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.6e-36 156.4 138 60.9
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 2.8e-36 155.6 123 64.2
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 8.1e-36 154.1 84 89.3
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 1.8e-35 152.9 150 57.3
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 1.8e-35 152.9 150 57.3
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.4e-35 152.5 112 66.1
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.1e-35 152.1 147 59.2
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.1e-35 152.1 143 60.1
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 4.0e-35 151.8 99 73.7
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.3e-35 151.4 141 60.3
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 5.3e-35 151.4 84 83.3
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 6.9e-35 151.0 119 66.4
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 6.9e-35 151.0 138 58.0
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 2.0e-34 149.4 136 56.6
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 2.6e-34 149.1 109 67.9
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 2.6e-34 149.1 149 56.4
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.6e-34 149.1 93 77.4
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 3.4e-34 148.7 149 55.7
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 4.5e-34 148.3 103 71.8
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 4.5e-34 148.3 113 68.1
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 5.8e-34 147.9 78 91.0
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 7.6e-34 147.5 103 71.8
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 9.9e-34 147.1 124 62.9
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 9.9e-34 147.1 124 62.9
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 9.9e-34 147.1 132 61.4
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.7e-33 146.4 145 57.2
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 3.8e-33 145.2 132 59.8
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 3.8e-33 145.2 78 89.7
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.9e-32 142.9 102 71.6
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.9e-32 142.9 118 66.1
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 2.4e-32 142.5 146 56.2
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 4.2e-32 141.7 155 56.8
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 5.4e-32 141.4 88 78.4
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 3.3e-29 132.1 85 70.6
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 9.6e-29 130.6 74 81.1
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 1.4e-27 126.7 98 64.3
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 2.4e-27 125.9 71 84.5
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 4.5e-26 121.7 105 62.9
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.3e-25 120.2 82 65.9
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.8e-25 118.6 112 60.7
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 6.4e-25 117.9 86 66.3
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 5.5e-24 114.8 79 65.8
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.3e-21 105.5 79 63.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 3.7e-20 102.1 123 52.8
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.4e-19 100.1 52 86.5
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 8.4e-17 90.9 68 72.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 1.4e-16 90.1 77 67.5
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 5.5e-08 61.6 57 59.6


User provided reference genes

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