Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G028100 Populus trichocarpa HOM05D008171 ORTHO05D006541 4.3e-150 534.6 274 100.0
Sabra04G0016000 Salix brachista HOM05D008171 ORTHO05D006541 3.6e-128 461.8 275 84.4
Manes.03G156600 Manihot esculenta HOM05D008171 ORTHO05D006541 6.4e-53 211.8 327 45.3
Potri.018G147100 Populus trichocarpa HOM05D008729 ORTHO05D006541 8.4e-37 158.3 233 45.1
Sabra18G0128500 Salix brachista HOM05D008171 ORTHO05D006541 3.2e-36 156.4 206 51.0
Gohir.D11G251100 Gossypium hirsutum HOM05D008171 ORTHO05D006541 6.2e-32 142.1 289 39.4
Gohir.A11G241700 Gossypium hirsutum HOM05D008171 ORTHO05D006541 1.2e-30 137.9 287 38.7
Gorai.007G269300 Gossypium raimondii HOM05D008171 ORTHO05D006541 1.2e-30 137.9 287 39.0
TWI09G1485 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 2.0e-30 137.1 252 40.1
TWI09G0902 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 1.3e-29 134.4 278 37.4
Duzib177G0581 Durio zibethinus HOM05D008171 ORTHO05D006541 1.1e-28 131.3 297 36.7
COL.COLO4_08914 Corchorus olitorius HOM05D008171 ORTHO05D006541 5.7e-25 119.0 294 37.1
VMungo1383G3710 Vigna mungo HOM05D008729 ORTHO05D006541 6.3e-24 115.5 243 36.6
Atru.chr3.807 Acer truncatum HOM05D008171 ORTHO05D006541 8.2e-24 115.2 245 37.6
RcHm_v2.0_Chr4g0396051 Rosa chinensis HOM05D013250 ORTHO05D006541 1.1e-23 114.8 226 39.8
Actinidia31699 Actinidia chinensis HOM05D008171 ORTHO05D006541 1.5e-22 110.9 279 31.5
Thecc.04G268400 Theobroma cacao HOM05D008171 ORTHO05D006541 1.5e-22 110.9 277 31.0
COL.COLO4_36427 Corchorus olitorius HOM05D008171 ORTHO05D006541 2.0e-22 110.5 291 35.4
Cpa.g.sc59.27 Carica papaya HOM05D008171 ORTHO05D006541 1.0e-21 108.2 301 30.2
Rhsim06G0142400 Rhododendron simsii HOM05D008729 ORTHO05D006541 1.0e-21 108.2 187 39.6
Phvul.008G026200 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 2.2e-21 107.1 246 33.7
Dinv29788 Davidia involucrata HOM05D008171 ORTHO05D006541 6.5e-21 105.5 192 39.1
Glyma.18G253500 Glycine max HOM05D008729 ORTHO05D006541 4.2e-20 102.8 172 41.9
Phvul.008G045500 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 4.2e-20 102.8 240 35.8
Aa31LG5G4300 Aethionema arabicum HOM05D008171 ORTHO05D006541 1.6e-19 100.9 301 28.6
Dinv43748 Davidia involucrata HOM05D008729 ORTHO05D006541 1.6e-19 100.9 254 31.9
SGA_v2.0_scaffold31G12622 Striga asiatica HOM05D014524 ORTHO05D006541 1.6e-19 100.9 271 31.4
FAN22G0719 Fragaria x ananassa HOM05D013250 ORTHO05D006541 2.1e-19 100.5 221 34.8
Ca_04035_v3 Cicer arietinum L. HOM05D008729 ORTHO05D006541 6.1e-19 99.0 188 37.2
Rhsim07G0050800 Rhododendron simsii HOM05D008171 ORTHO05D006541 7.9e-19 98.6 257 32.7
Carub.0004s1355 Capsella rubella HOM05D008171 ORTHO05D006541 1.4e-18 97.8 300 30.7
ClCG09G011900 Citrullus lanatus HOM05D008171 ORTHO05D006541 1.8e-18 97.4 268 33.2
Haze_11490 Corylus avellana HOM05D008171 ORTHO05D006541 2.3e-18 97.1 321 33.0
SalBow8G4971 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.3e-18 97.1 252 31.3
Cc03_g06490 Coffea canephora HOM05D008171 ORTHO05D006541 3.0e-18 96.7 276 29.7
MSTRG.14227 Avicennia marina HOM05D014524 ORTHO05D006541 3.9e-18 96.3 263 32.3
MD16G1230200 Malus domestica HOM05D013250 ORTHO05D006541 5.1e-18 95.9 249 31.3
Cfa014809 Carpinus fangiana HOM05D008171 ORTHO05D006541 6.7e-18 95.5 313 33.9
Migut.N00307 Erythranthe guttata HOM05D014524 ORTHO05D006541 1.1e-17 94.7 129 39.5
Prupe.1G051700 Prunus persica HOM05D013250 ORTHO05D006541 1.1e-17 94.7 251 33.5
AL4G27600 Arabidopsis lyrata HOM05D008171 ORTHO05D006541 1.9e-17 94.0 303 33.0
Thhalv10016999m.g Eutrema salsugineum HOM05D008171 ORTHO05D006541 4.3e-17 92.8 301 29.6
SGA_v2.0_scaffold577G53017 Striga asiatica HOM05D014524 ORTHO05D006541 1.3e-16 91.3 175 34.3
AT2G32235 Arabidopsis thaliana HOM05D008171 ORTHO05D006541 3.7e-16 89.7 307 30.9
BcaB02g10481 Brassica carinata HOM05D008171 ORTHO05D006541 4.8e-16 89.4 241 30.7
TPR.G6386 Trifolium pratense HOM05D008729 ORTHO05D006541 1.1e-15 88.2 192 31.2
Lj1g0024023 Lotus japonicus HOM05D008729 ORTHO05D006541 1.4e-15 87.8 183 40.4
QL06p021862 Quercus lobata HOM05D008171 ORTHO05D006541 1.8e-15 87.4 246 32.9
PGR119G2083 Punica granatum HOM05D008729 ORTHO05D006541 3.1e-15 86.7 213 33.3
THA.LOC104826159 Tarenaya hassleriana HOM05D008171 ORTHO05D006541 5.3e-15 85.9 242 34.7
A05p13010 Brassica napus HOM05D008171 ORTHO05D006541 9.1e-15 85.1 232 30.6
C04p17400 Brassica napus HOM05D008171 ORTHO05D006541 1.2e-14 84.7 237 30.8
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 1.2e-14 84.7 237 30.8
TPR.G16999 Trifolium pratense HOM05D008729 ORTHO05D006541 1.5e-14 84.3 213 31.5
Eucgr.F04204 Eucalyptus grandis HOM05D008729 ORTHO05D006541 2.0e-14 84.0 155 35.5
BcaB01g03996 Brassica carinata HOM05D008171 ORTHO05D006541 2.6e-14 83.6 312 28.2
Psat3g195600 Pisum sativum HOM05D008729 ORTHO05D006541 3.4e-14 83.2 192 31.8
CANSAT78G0015 Cannabis sativa HOM05D008171 ORTHO05D006541 4.5e-14 82.8 328 30.5
FvH4_4g05130 Fragaria vesca HOM05D013250 ORTHO05D006541 4.5e-14 82.8 156 35.3
BraA05t20241Z Brassica rapa HOM05D008171 ORTHO05D006541 7.7e-14 82.0 286 28.0
FAN12G1247 Fragaria x ananassa HOM05D013250 ORTHO05D006541 1.0e-13 81.6 156 34.6
arahy.Tifrunner.gnm1.ann1.R8XUDN Arachis hypogaea HOM05D008729 ORTHO05D006541 1.7e-13 80.9 259 31.3
CsaV3_3G049130 Cucumis sativus L. HOM05D008171 ORTHO05D006541 1.7e-13 80.9 277 30.3
C03p21100 Brassica napus HOM05D008171 ORTHO05D006541 2.9e-13 80.1 312 27.6
Medtr4g072710 Medicago truncatula HOM05D008729 ORTHO05D006541 3.8e-13 79.7 218 30.7
CiPaw.01G175900 Carya illinoinensis HOM05D008171 ORTHO05D006541 5.0e-13 79.3 95 44.2
PGSC0003DMG400000820 Solanum tuberosum HOM05D008171 ORTHO05D006541 6.5e-13 79.0 200 34.0
Oeu061870.1 Olea europaea HOM05D008729 ORTHO05D006541 8.5e-13 78.6 122 35.2
Medtr5g069720 Medicago truncatula HOM05D008729 ORTHO05D006541 1.1e-12 78.2 258 29.8
BolC3t14492H Brassica oleracea HOM05D008171 ORTHO05D006541 1.9e-12 77.4 321 27.1
DCAR_002271 Daucus carota HOM05D008729 ORTHO05D006541 1.9e-12 77.4 217 31.8
Sopen05g005780 Solanum pennellii HOM05D008171 ORTHO05D006541 1.9e-12 77.4 98 42.9
Cc00_g01630 Coffea canephora HOM05D008729 ORTHO05D006541 4.2e-12 76.3 100 42.0
BcaC01g05917 Brassica carinata HOM05D008171 ORTHO05D006541 5.5e-12 75.9 320 27.5
A03p18070 Brassica napus HOM05D008171 ORTHO05D006541 5.5e-12 75.9 307 27.7
Ciclev10005715m.g Citrus clementina HOM05D008171 ORTHO05D006541 7.2e-12 75.5 194 36.1
arahy.Tifrunner.gnm1.ann1.YJLF6P Arachis hypogaea HOM05D008729 ORTHO05D006541 9.4e-12 75.1 268 29.5
Sed0013719 Sechium edule HOM05D008171 ORTHO05D006541 9.4e-12 75.1 272 33.5
COL.COLO4_37412 Corchorus olitorius HOM05D008171 ORTHO05D006541 1.6e-11 74.3 75 52.0
Medtr4g072520 Medicago truncatula HOM05D008729 ORTHO05D006541 2.1e-11 73.9 216 29.6
FAN07G2840 Fragaria x ananassa HOM05D004513 ORTHO05D005459 2.7e-11 73.6 134 33.6
SalBow3G3100 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.7e-11 73.6 241 28.2
CARHR126020 Cardamine hirsuta HOM05D008171 ORTHO05D006541 1.0e-10 71.6 296 27.7
FAN17G0494 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.0e-10 71.6 53 56.6
Prupe.1G335500 Prunus persica HOM05D008171 ORTHO05D006541 1.0e-10 71.6 205 31.2
RcHm_v2.0_Chr4g0442521 Rosa chinensis HOM05D013250 ORTHO05D006541 1.4e-10 71.2 53 56.6
FAN12G2236 Fragaria x ananassa HOM05D022272 ORTHO05D006541 2.3e-10 70.5 119 34.5
FvH4_4g33320 Fragaria vesca HOM05D022272 ORTHO05D006541 6.7e-10 68.9 125 30.4
MD13G1018300 Malus domestica HOM05D008171 ORTHO05D006541 6.7e-10 68.9 151 30.5
FAN07G0121 Fragaria x ananassa HOM05D022272 ORTHO05D006541 8.8e-10 68.6 119 32.8
Medtr4g072430 Medicago truncatula HOM05D008729 ORTHO05D006541 1.1e-09 68.2 224 28.1
FAN22G1062 Fragaria x ananassa HOM05D022272 ORTHO05D006541 2.0e-09 67.4 118 33.1
Hma1.2p1_1240F.1_g269530 Hydrangea macrophylla HOM05D008729 ORTHO05D006541 2.0e-09 67.4 92 35.9
Nitab4.5_0009780g0020 Nicotiana tabacum HOM05D008171 ORTHO05D006541 2.6e-09 67.0 122 35.2
TWI73G1043 Tripterygium wilfordii HOM05D008729 ORTHO05D006541 3.3e-09 66.6 233 33.5
Sp4g14600 Schrenkiella parvula HOM05D008171 ORTHO05D006541 4.4e-09 66.2 329 24.6
Nitab4.5_0004705g0050 Nicotiana tabacum HOM05D008171 ORTHO05D006541 5.7e-09 65.9 135 34.8
Thecc.05G282200 Theobroma cacao HOM05D008171 ORTHO05D006541 5.7e-09 65.9 58 53.4
Glyma.09G242100 Glycine max HOM05D008729 ORTHO05D006541 7.4e-09 65.5 94 48.9
Medtr7g007830 Medicago truncatula HOM05D008729 ORTHO05D006541 1.3e-08 64.7 234 28.6
Medtr5g069420 Medicago truncatula HOM05D008729 ORTHO05D006541 1.7e-08 64.3 261 28.7
DCAR_027373 Daucus carota HOM05D008171 ORTHO05D006541 2.2e-08 63.9 208 30.3
Lalb_Chr03g0040281 Lupinus albus HOM05D008729 ORTHO05D006541 2.2e-08 63.9 233 27.9
Medtr4g052440 Medicago truncatula HOM05D008729 ORTHO05D006541 1.1e-07 61.6 251 26.3
Atru.chr6.2064 Acer truncatum HOM05D008171 ORTHO05D006541 3.1e-07 60.1 250 30.0
Medtr5g008380 Medicago truncatula HOM05D008729 ORTHO05D006541 3.1e-07 60.1 228 28.9
MELO3C003414.2 Cucumis melo HOM05D008171 ORTHO05D006541 6.9e-07 58.9 98 31.6
Medtr5g068870 Medicago truncatula HOM05D008729 ORTHO05D006541 2.6e-06 57.0 228 28.1
Medtr5g069080 Medicago truncatula HOM05D008729 ORTHO05D006541 3.4e-06 56.6 41 51.2
TPR.G30636 Trifolium pratense HOM05D008729 ORTHO05D006541 3.4e-06 56.6 58 43.1
unitig_21.g20743 Utricularia gibba HOM05D050672 ORTHO05D006541 7.7e-06 55.5 70 40.0


User provided reference genes

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