Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 0.0e+00 1363.2 712 100.0
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 0.0e+00 1176.8 722 84.5
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 4.4e-239 831.6 697 64.1
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 1.3e-230 803.5 702 62.8
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 1.3e-225 786.9 703 62.3
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 8.1e-225 784.3 718 62.7
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 3.4e-223 778.9 711 61.9
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 3.5e-212 742.3 712 60.1
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 1.3e-209 733.8 718 56.7
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 2.5e-205 719.5 708 58.2
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 1.0e-203 714.1 702 58.1
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 3.0e-203 712.6 706 58.1
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 1.9e-202 709.9 708 57.6
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 7.7e-199 698.0 712 57.4
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 1.4e-197 693.7 689 58.5
CiPaw.09G091700 Carya illinoinensis HOM05D007941 ORTHO05D010050 1.9e-197 693.3 635 60.8
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 4.2e-197 692.2 715 55.5
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 8.8e-195 684.5 699 57.1
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 3.4e-191 672.5 720 55.4
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 4.5e-191 672.2 739 54.8
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 3.2e-189 666.0 701 55.3
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 4.2e-189 665.6 733 53.8
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 1.0e-182 644.4 724 55.5
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 3.8e-174 615.9 705 52.1
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 8.5e-174 614.8 703 52.6
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 4.0e-171 605.9 675 52.9
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 5.2e-171 605.5 714 51.8
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 2.6e-170 603.2 704 51.6
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 5.7e-170 602.1 700 50.7
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 9.8e-170 601.3 707 51.5
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 9.5e-165 584.7 727 49.7
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 5.7e-162 575.5 725 48.7
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 2.9e-158 563.1 706 49.2
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 5.0e-158 562.4 712 48.7
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 3.6e-156 556.2 700 49.9
Lj1C1230T3 Lonicera japonica HOM05D007941 ORTHO05D010050 8.3e-153 545.0 589 53.5
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 6.6e-150 535.4 700 48.1
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 6.6e-150 535.4 717 47.1
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 5.6e-149 532.3 702 48.9
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 9.5e-149 531.6 691 48.8
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 2.0e-146 523.9 708 47.3
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 1.3e-142 511.1 721 45.9
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 1.2e-140 504.6 673 47.8
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 1.1e-139 501.5 669 46.9
CiPaw.09G091500 Carya illinoinensis HOM05D007941 ORTHO05D010050 2.3e-139 500.4 420 64.5
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 3.7e-137 493.0 806 42.1
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 6.4e-137 492.3 422 63.0
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 1.3e-134 484.6 694 48.1
Nn1g03523 Nelumbo nucifera HOM05D007941 ORTHO05D010050 3.8e-129 466.5 374 65.0
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 5.4e-128 462.6 690 45.7
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 3.9e-126 456.4 673 46.4
AUR62012706 Chenopodium quinoa HOM05D007941 ORTHO05D010050 1.6e-116 424.5 554 46.4
CDE05G3547 Ceratophyllum demersum HOM05D007941 ORTHO05D010050 1.8e-115 421.0 504 50.6
EL10Ac8g20054 Beta vulgaris HOM05D007941 ORTHO05D010050 5.8e-114 416.0 649 44.7
FAN21G2241 Fragaria x ananassa HOM05D007941 ORTHO05D010050 2.8e-108 397.1 340 61.8
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 1.7e-105 387.9 479 49.7
Hma1.2p1_0749F.1_g212520 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 1.4e-104 384.8 207 86.5
Hma1.2p1_0749F.1_g212543 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 1.4e-104 384.8 207 86.5
Pp3c25_7620 Physcomitrium patens HOM05D007941 ORTHO05D010050 6.5e-97 359.4 627 40.0
Mapoly0124s0009 Marchantia polymorpha HOM05D007941 ORTHO05D010050 4.2e-96 356.7 684 39.8
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 3.2e-64 250.8 753 31.5
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 2.5e-48 198.0 266 49.6
Glyma.07G260250 Glycine max HOM05D007941 ORTHO05D010050 1.6e-47 195.3 360 37.8
Dinv20049 Davidia involucrata HOM05D007941 ORTHO05D010050 4.9e-44 183.7 209 51.7
SEGI_08485 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.1e-39 168.3 283 42.4
AUR62021948 Chenopodium quinoa HOM05D007941 ORTHO05D010050 2.3e-38 164.9 245 44.5
SEGI_18097 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.8e-31 141.4 311 38.3
AUR62021949 Chenopodium quinoa HOM05D007941 ORTHO05D010050 8.1e-31 139.8 320 37.2
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 1.2e-29 136.0 182 47.3
ATR0794G083 Amborella trichopoda HOM05D007941 ORTHO05D010050 4.9e-28 130.6 247 40.5
SEGI_17062 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.1e-27 129.4 70 82.9
ATR0794G095 Amborella trichopoda HOM05D007941 ORTHO05D010050 6.8e-22 110.2 218 39.4
PSO210G6634 Papaver somniferum HOM05D007941 ORTHO05D010050 5.2e-14 84.0 133 36.8
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 1.2e-13 82.8 117 56.4
PGSC0003DMG400005076 Solanum tuberosum HOM05D007941 ORTHO05D010050 1.1e-08 66.2 190 28.9
Medtr4g132090 Medicago truncatula HOM05D007941 ORTHO05D010050 1.1e-06 59.7 159 34.0


User provided reference genes

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