Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G015034 Populus trichocarpa HOM05D002890 ORTHO05D005855 6.7e-131 470.7 238 100.0
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 5.1e-107 391.3 234 84.6
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 1.8e-104 382.9 234 82.5
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 1.1e-56 224.2 249 51.8
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 1.4e-56 223.8 235 52.8
Atru.chr10.2228 Acer truncatum HOM05D002890 ORTHO05D005855 4.1e-56 222.2 252 51.2
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 7.8e-55 218.0 257 52.1
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 2.3e-54 216.5 248 50.4
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 5.0e-54 215.3 242 50.8
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 2.1e-52 209.9 250 49.6
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 2.1e-52 209.9 249 48.6
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 4.7e-52 208.8 251 49.0
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 1.8e-51 206.8 250 48.8
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 3.1e-51 206.1 243 50.6
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 3.1e-51 206.1 254 49.6
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 4.0e-51 205.7 243 50.6
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 4.0e-51 205.7 250 48.8
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 9.8e-50 201.1 256 46.9
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 9.8e-50 201.1 256 46.9
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 4.9e-49 198.7 251 48.6
Actinidia10696 Actinidia chinensis HOM05D002890 ORTHO05D005855 7.0e-48 194.9 251 47.4
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.1e-47 193.4 250 47.2
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 1.0e-46 191.0 234 48.3
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.3e-46 190.7 251 47.4
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 3.9e-46 189.1 239 48.5
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 3.9e-46 189.1 240 48.3
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 1.1e-43 181.0 243 46.5
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 1.4e-43 180.6 242 46.3
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 5.2e-43 178.7 243 46.5
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 6.8e-43 178.3 236 48.3
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 8.9e-43 177.9 237 46.8
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 2.6e-42 176.4 249 47.0
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 2.6e-42 176.4 234 47.0
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 3.4e-42 176.0 235 45.1
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 3.4e-42 176.0 251 46.6
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 7.5e-42 174.9 238 46.2
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 7.5e-42 174.9 234 46.6
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 1.7e-41 173.7 233 46.4
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 2.2e-41 173.3 242 46.3
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 2.9e-41 172.9 234 44.4
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 2.9e-41 172.9 240 44.2
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 1.9e-40 170.2 240 44.2
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 3.2e-40 169.5 242 45.9
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 3.2e-40 169.5 242 45.5
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 3.2e-40 169.5 242 45.5
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 4.1e-40 169.1 242 45.5
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 5.4e-40 168.7 253 45.1
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.6e-39 167.2 233 43.8
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 1.6e-39 167.2 236 44.5
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 1.7e-38 163.7 253 42.3
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 3.9e-38 162.5 253 41.9
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.9e-37 160.2 218 45.4
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 2.5e-37 159.8 253 41.5
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 7.3e-37 158.3 262 40.5
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 8.1e-36 154.8 234 40.6
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 4.0e-35 152.5 253 39.9
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 2.0e-34 150.2 249 42.2
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 2.6e-34 149.8 234 41.0
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 3.4e-34 149.4 236 42.8
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 3.4e-34 149.4 254 40.2
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 4.4e-34 149.1 249 42.2
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 7.6e-34 148.3 256 40.2
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 1.7e-33 147.1 236 42.4
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 4.9e-33 145.6 252 39.7
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 8.4e-33 144.8 233 41.2
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 8.4e-33 144.8 235 38.3
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 1.9e-32 143.7 242 40.5
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 1.9e-32 143.7 236 40.7
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 2.4e-32 143.3 248 38.7
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 3.2e-32 142.9 245 40.0
SGA_v2.0_scaffold25G10747 Striga asiatica HOM05D002890 ORTHO05D005855 4.2e-32 142.5 239 40.2
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 1.6e-31 140.6 242 40.1
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 2.1e-31 140.2 236 40.3
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 2.1e-31 140.2 253 39.9
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 2.7e-31 139.8 243 38.7
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 2.7e-31 139.8 256 40.6
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 4.6e-31 139.0 233 39.9
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 1.3e-30 137.5 233 40.3
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.3e-30 137.5 258 37.6
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 1.7e-30 137.1 270 39.6
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 1.7e-30 137.1 234 39.3
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 2.3e-30 136.7 239 41.0
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 3.0e-30 136.3 243 38.3
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 3.9e-30 136.0 247 39.7
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 5.1e-30 135.6 234 40.6
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 5.1e-30 135.6 234 40.6
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 5.1e-30 135.6 234 40.6
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 5.1e-30 135.6 234 40.6
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 6.6e-30 135.2 235 39.6
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 6.6e-30 135.2 255 41.2
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 1.5e-29 134.0 260 38.1
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 1.5e-29 134.0 252 39.3
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 2.8e-28 129.8 235 38.3
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 1.1e-27 127.9 256 38.3
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 9.0e-27 124.8 261 35.6
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 1.2e-26 124.4 239 38.5
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 1.9e-24 117.1 248 34.7
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 5.4e-24 115.5 233 36.1
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 7.1e-24 115.2 246 36.2
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 7.1e-24 115.2 257 35.0
SEGI_38151 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 7.1e-24 115.2 257 35.0
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 4.6e-23 112.5 250 35.2
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.9e-22 109.4 99 56.6
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 1.6e-20 104.0 235 37.4
MD05G1347100 Malus domestica HOM05D002890 ORTHO05D005855 3.1e-19 99.8 211 32.7
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 4.0e-19 99.4 234 35.9
Mapoly0029s0108 Marchantia polymorpha HOM05D002890 ORTHO05D005855 1.5e-18 97.4 140 44.3
SHI01979 Sapria himalayana HOM05D002890 ORTHO05D005855 3.5e-15 86.3 73 63.0
BcaC04g22581 Brassica carinata HOM05D002890 ORTHO05D007906 6.7e-14 82.0 62 62.9
QL05p073148 Quercus lobata HOM05D002890 ORTHO05D005855 6.9e-11 72.0 182 33.0
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 5.8e-10 68.9 122 39.3
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 2.9e-09 66.6 197 28.9
Nitab4.5_0000267g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 3.2e-08 63.2 145 33.8
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 3.5e-07 59.7 151 34.4
Oeu002905.1 Olea europaea HOM05D002890 ORTHO05D005855 7.9e-07 58.5 126 33.3
HPP92_025077 Vanilla planifolia HOM05D002890 ORTHO05D005855 1.8e-06 57.4 176 33.0


User provided reference genes

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