Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.8e-66 255.0 118 100.0
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.5e-51 203.8 117 77.8
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.4e-49 199.5 117 76.9
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-48 195.3 117 72.6
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-46 187.6 117 72.6
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-46 187.6 117 71.8
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-46 187.6 117 72.6
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 7.3e-46 187.2 117 72.6
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 2.1e-45 185.7 117 71.8
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-45 184.5 117 70.9
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-45 184.5 117 70.9
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-44 183.3 117 70.1
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-44 182.2 116 70.7
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-44 182.2 117 70.1
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 5.2e-44 181.0 117 70.1
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 1.6e-40 169.5 117 67.5
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 1.6e-40 169.5 117 67.5
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 8.1e-37 157.1 108 66.7
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.6e-32 141.4 114 55.3
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.0e-32 141.0 115 56.5
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-26 123.2 115 51.3
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.1e-21 104.0 112 48.2
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 5.3e-20 101.3 119 45.4
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 2.9e-18 95.5 119 44.5
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-18 95.5 110 40.0
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.4e-18 94.4 111 42.3
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 4.2e-17 91.7 112 42.0
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.1e-17 90.9 111 36.9
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 4.6e-16 88.2 111 37.8
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-15 86.7 99 38.4
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-15 86.7 108 45.4
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 5.1e-15 84.7 105 44.8
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.7e-15 84.3 105 43.8
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 8.7e-15 84.0 122 41.0
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.5e-14 83.2 93 45.2
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-14 83.2 108 40.7
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 4.3e-14 81.6 121 40.5
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-14 81.3 108 42.6
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.6e-13 79.7 93 43.0
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.8e-13 79.0 93 41.9
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 8.1e-13 77.4 91 42.9
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-13 77.4 106 40.6
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-12 76.6 112 42.0
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-12 75.5 108 38.9
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.1e-12 75.5 108 38.9
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-12 75.5 111 38.7
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 3.1e-12 75.5 94 43.6
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 4.0e-12 75.1 104 41.3
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 4.0e-12 75.1 82 48.8
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 5.3e-12 74.7 95 42.1
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 6.9e-12 74.3 104 41.3
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.0e-12 73.9 103 36.9
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-11 73.2 112 36.6
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-11 72.8 113 37.2
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-11 72.8 111 36.0
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 2.6e-11 72.4 94 41.5
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 2.6e-11 72.4 89 40.4
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.6e-11 70.9 107 37.4
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 7.6e-11 70.9 111 36.0
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-10 70.1 107 37.4
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-10 69.3 107 36.4
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 2.2e-10 69.3 114 38.6
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.8e-10 68.6 109 33.0
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 4.9e-10 68.2 101 39.6
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.4e-10 67.8 95 38.9
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.4e-10 67.8 109 32.1
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 8.4e-10 67.4 113 34.5
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.4e-10 67.4 109 33.0
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.4e-10 67.4 91 37.4
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 8.4e-10 67.4 89 38.2
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.1e-09 67.0 91 38.5
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-09 66.6 107 36.4
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-09 66.6 107 35.5
COL.COLO4_17180 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.4e-09 65.9 109 32.1
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-09 65.9 107 35.5
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.2e-09 65.1 107 34.6
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.2e-09 65.1 107 34.6
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.2e-09 65.1 107 34.6
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 4.2e-09 65.1 74 47.3
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.5e-09 64.7 102 33.3
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.5e-09 64.7 107 35.5
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.5e-09 64.7 79 41.8
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 5.5e-09 64.7 95 37.9
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.1e-09 64.3 109 31.2
Gohir.D02G213300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.1e-09 64.3 88 33.0
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 7.1e-09 64.3 109 34.9
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 7.1e-09 64.3 89 36.0
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 7.1e-09 64.3 112 37.5
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-08 63.5 82 35.4
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-08 63.5 119 30.3
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-08 63.5 109 36.7
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-08 63.2 109 36.7
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 2.1e-08 62.8 108 33.3
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-08 62.4 114 35.1
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.7e-08 62.4 114 35.1
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 2.7e-08 62.4 97 32.0
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.7e-08 62.4 107 33.6
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-08 62.0 102 32.4
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.5e-08 62.0 102 32.4
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.6e-08 61.6 110 33.6
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 6.0e-08 61.2 111 35.1
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 6.0e-08 61.2 111 35.1
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 7.9e-08 60.8 95 36.8
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 7.9e-08 60.8 107 33.6
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.0e-07 60.5 107 32.7
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-07 60.1 113 32.7
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-07 60.1 109 33.0
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-07 60.1 109 33.0
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 1.3e-07 60.1 94 36.2
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-07 60.1 115 32.2
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 1.8e-07 59.7 111 33.3
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-07 59.3 99 33.3
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-07 58.5 113 32.7
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 5.1e-07 58.2 94 36.2
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.7e-07 57.8 102 32.4
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-07 57.8 105 33.3
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-07 57.8 107 32.7
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-06 57.0 85 34.1
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-06 56.6 111 32.4
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.5e-06 56.6 111 34.2
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.9e-06 56.2 103 35.9
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 2.5e-06 55.8 109 32.1
Cpa.g.sc48.191 Carica papaya HOM05D007656 ORTHO05D008529 3.3e-06 55.5 92 33.7
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-06 55.5 119 35.3
Potri.003G011250 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-06 55.1 113 30.1
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 4.3e-06 55.1 65 36.9
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 5.6e-06 54.7 108 27.8
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 9.6e-06 53.9 114 32.5


User provided reference genes

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