Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.1e-73 277.3 135 100.0
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.1e-29 133.7 108 60.2
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 3.5e-28 128.6 112 56.2
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.1e-27 124.8 112 54.5
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-26 121.3 112 52.7
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 2.0e-23 112.8 114 48.2
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-22 109.8 105 50.5
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 7.9e-20 100.9 87 57.5
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.1e-18 97.1 106 46.2
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-18 94.4 105 46.7
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-16 89.7 103 45.6
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.0e-16 87.4 109 42.2
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.5e-13 78.2 123 35.0
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.1e-13 77.8 123 34.1
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.0e-12 74.7 110 33.6
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.0e-12 74.7 110 33.6
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.0e-12 74.7 105 34.3
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 7.9e-12 74.3 102 35.3
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-11 73.6 104 37.5
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-11 73.2 113 38.9
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 5.1e-11 71.6 102 34.3
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-10 70.5 101 33.7
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-10 70.1 105 35.2
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-10 69.7 113 38.1
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 1.9e-10 69.7 96 39.6
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.5e-10 69.3 105 35.2
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-10 69.3 106 37.7
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 3.3e-10 68.9 101 39.6
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.3e-10 68.9 102 34.3
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.3e-10 68.6 102 32.4
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-10 68.6 105 32.4
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.6e-10 68.2 102 36.3
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.6e-10 68.2 107 36.4
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 5.6e-10 68.2 105 33.3
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.4e-10 67.8 113 36.3
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.6e-10 67.4 102 34.3
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 9.6e-10 67.4 120 33.3
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 1.3e-09 67.0 113 27.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 2.1e-09 66.2 101 38.6
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 2.1e-09 66.2 110 39.1
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-09 66.2 113 35.4
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 2.1e-09 66.2 105 37.1
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.8e-09 65.9 87 35.6
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.7e-09 65.5 90 41.1
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 3.7e-09 65.5 88 43.2
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-09 65.5 102 33.3
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 4.8e-09 65.1 100 35.0
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.8e-09 65.1 97 33.0
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-09 65.1 102 33.3
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-09 65.1 102 33.3
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.8e-09 65.1 106 33.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 6.2e-09 64.7 102 33.3
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 6.2e-09 64.7 85 38.8
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 6.2e-09 64.7 122 34.4
AUR62019865 Chenopodium quinoa HOM05D002599 ORTHO05D001895 8.2e-09 64.3 105 36.2
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.2e-09 64.3 117 29.9
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.9 99 34.3
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.1e-08 63.9 90 40.0
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-08 63.9 111 33.3
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-08 63.9 102 32.4
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-08 63.9 102 32.4
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-08 63.9 102 32.4
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.4e-08 63.5 90 40.0
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-08 63.5 102 31.4
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-08 63.5 108 36.1
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 1.8e-08 63.2 101 36.6
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-08 63.2 102 33.3
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-08 63.2 102 33.3
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-08 63.2 75 44.0
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-08 62.8 113 31.9
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-08 62.8 102 31.4
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-08 62.8 104 33.7
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-08 62.8 109 33.0
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 3.1e-08 62.4 111 37.8
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 3.1e-08 62.4 100 35.0
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 3.1e-08 62.4 89 39.3
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-08 62.4 104 34.6
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-08 62.4 107 35.5
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.0e-08 62.0 99 33.3
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-08 62.0 87 35.6
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-08 62.0 87 35.6
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-08 62.0 87 35.6
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 5.3e-08 61.6 89 40.4
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-08 61.6 87 35.6
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.9e-08 61.2 104 37.5
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 6.9e-08 61.2 91 40.7
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 6.9e-08 61.2 89 39.3
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 6.9e-08 61.2 87 34.5
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 6.9e-08 61.2 87 35.6
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 9.0e-08 60.8 97 35.1
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-07 60.5 108 35.2
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-07 60.5 99 33.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-07 60.5 99 35.4
Duzib187G0682 Durio zibethinus HOM05D002599 ORTHO05D001895 2.0e-07 59.7 101 34.7
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.6e-07 59.3 99 33.3
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-07 59.3 100 35.0
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 2.6e-07 59.3 88 37.5
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 2.6e-07 59.3 88 37.5
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.4e-07 58.9 102 35.3
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 3.4e-07 58.9 90 37.8
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 4.5e-07 58.5 101 33.7
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 5.8e-07 58.2 105 38.1
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.8e-07 58.2 113 31.0
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 5.8e-07 58.2 101 35.6
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.6e-07 57.8 113 31.0
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.6e-07 57.8 100 35.0
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-06 56.2 100 35.0
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 2.2e-06 56.2 99 36.4
Gohir.A04G130712 Gossypium hirsutum HOM05D019153 ORTHO05D001895 2.9e-06 55.8 98 32.7
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.8e-06 55.5 82 35.4
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 4.9e-06 55.1 106 30.2
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 6.5e-06 54.7 99 35.4
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 6.5e-06 54.7 120 34.2
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.4e-06 54.3 87 36.8


User provided reference genes

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