Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.2e-75 286.6 156 100.0
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.7e-58 229.6 156 82.1
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.7e-58 229.6 156 82.1
Sabra11G0011600 Salix brachista HOM05D001288 ORTHO05D010389 4.8e-53 211.5 149 79.2
Sabra11G0010100 Salix brachista HOM05D008262 ORTHO05D010389 1.9e-49 199.5 152 75.7
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 2.5e-33 146.0 169 57.4
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 1.7e-29 133.3 163 55.8
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 4.8e-29 131.7 167 55.1
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 8.2e-29 131.0 163 55.8
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 8.2e-29 131.0 149 59.7
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.8e-28 129.8 151 56.3
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 2.6e-27 125.9 161 51.6
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 3.4e-27 125.6 151 55.0
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 4.5e-27 125.2 153 56.9
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 7.7e-27 124.4 151 54.3
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 2.9e-26 122.5 165 49.1
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 8.5e-26 120.9 139 56.1
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.9e-25 119.8 144 58.3
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 4.2e-25 118.6 149 51.0
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 1.1e-22 110.5 167 49.1
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 7.4e-22 107.8 160 48.8
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 1.8e-20 103.2 126 54.8
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 5.3e-20 101.7 169 43.2
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 5.3e-20 101.7 169 43.2
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 7.0e-20 101.3 163 46.6
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 9.1e-20 100.9 146 50.7
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 2.6e-19 99.4 162 45.7
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 1.4e-17 93.6 155 41.3
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 4.2e-17 92.0 158 41.1
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 7.2e-17 91.3 142 44.4
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 9.4e-17 90.9 169 45.6
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 2.1e-16 89.7 165 42.4
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 3.6e-16 89.0 135 45.9
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 2.3e-15 86.3 131 45.8
CiPaw.09G098200 Carya illinoinensis HOM05D008262 ORTHO05D010389 3.9e-15 85.5 171 40.9
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 3.9e-15 85.5 152 42.8
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 1.5e-14 83.6 155 41.9
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 1.7e-13 80.1 88 56.8
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 2.8e-13 79.3 135 43.0
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 2.8e-13 79.3 153 39.2
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 4.8e-13 78.6 135 43.0
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 1.4e-12 77.0 156 42.9
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 1.8e-12 76.6 103 51.5
MELO3C007418.2 Cucumis melo HOM05D008262 ORTHO05D010389 3.1e-12 75.9 156 39.1
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 4.1e-12 75.5 151 36.4
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 4.1e-12 75.5 151 36.4
Carub.0007s1916 Capsella rubella HOM05D008262 ORTHO05D010389 9.1e-12 74.3 121 46.3
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 1.2e-11 73.9 163 39.9
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 1.2e-11 73.9 151 36.4
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 1.2e-11 73.9 151 36.4
Eucgr.E03985 Eucalyptus grandis HOM05D008262 ORTHO05D010389 1.2e-11 73.9 166 39.8
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 7.7e-11 71.2 158 38.0
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 7.7e-11 71.2 133 43.6
Thhalv10026500m.g Eutrema salsugineum HOM05D008262 ORTHO05D010389 1.5e-09 67.0 85 50.6
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 2.5e-09 66.2 105 41.0
HanXRQChr15g0470801 Helianthus annuus HOM05D008262 ORTHO05D010389 4.2e-09 65.5 110 40.0
MBI05_g29353_MAGBIO Magnolia biondii HOM05D008262 ORTHO05D010389 1.8e-07 60.1 84 46.4
Nn1g06180 Nelumbo nucifera HOM05D008262 ORTHO05D010389 1.2e-06 57.4 55 58.2
Ciclev10024162m.g Citrus clementina HOM05D008262 ORTHO05D010389 2.6e-06 56.2 83 51.8


User provided reference genes

Program Settings