Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G213050 Populus trichocarpa HOM05D005606 ORTHO05D006446 1.1e-159 566.6 281 100.0
Potri.001G013300 Populus trichocarpa HOM05D005606 ORTHO05D006446 9.6e-121 437.2 280 80.7
Sabra01G0009700 Salix brachista HOM05D005606 ORTHO05D006446 1.0e-117 427.2 280 78.9
Dinv09771 Davidia involucrata HOM05D005606 ORTHO05D006446 1.3e-93 347.1 281 65.8
Atru.chr9.366 Acer truncatum HOM05D005606 ORTHO05D006446 3.8e-93 345.5 281 65.1
Nn4g24861 Nelumbo nucifera HOM05D005606 ORTHO05D006446 8.5e-93 344.4 280 63.2
GSVIVG01012914001 Vitis vinifera HOM05D005606 ORTHO05D006446 3.2e-92 342.4 281 65.5
Manes.03G090364 Manihot esculenta HOM05D005606 ORTHO05D006446 4.2e-92 342.0 281 66.5
TWI81G0505 Tripterygium wilfordii HOM05D005606 ORTHO05D006446 7.9e-91 337.8 281 62.6
FvH4_3g04970 Fragaria vesca HOM05D005606 ORTHO05D006446 3.7e-88 328.9 280 62.9
FAN16G3646 Fragaria x ananassa HOM05D005606 ORTHO05D006446 6.3e-88 328.2 280 62.5
FAN21G0753 Fragaria x ananassa HOM05D005606 ORTHO05D006446 6.3e-88 328.2 280 62.9
FAN11G2201 Fragaria x ananassa HOM05D005606 ORTHO05D006446 8.2e-88 327.8 280 62.5
CiPaw.09G118900 Carya illinoinensis HOM05D005606 ORTHO05D006446 1.4e-87 327.0 281 63.0
Ciclev10023713m.g Citrus clementina HOM05D005606 ORTHO05D006446 1.4e-87 327.0 281 61.9
FAN25G1117 Fragaria x ananassa HOM05D005606 ORTHO05D006446 1.8e-87 326.6 280 62.1
Lj5A166G73 Lonicera japonica HOM05D005606 ORTHO05D006446 3.1e-87 325.9 281 60.9
PSO063G0483 Papaver somniferum HOM05D005606 ORTHO05D006446 4.1e-87 325.5 280 59.6
RcHm_v2.0_Chr5g0015011 Rosa chinensis HOM05D005606 ORTHO05D006446 4.1e-87 325.5 280 63.2
Thecc.03G071900 Theobroma cacao HOM05D005606 ORTHO05D006446 7.0e-87 324.7 281 61.6
Actinidia37370 Actinidia chinensis HOM05D005606 ORTHO05D006446 1.2e-86 323.9 282 61.3
SalBow5G2126 Salvia bowleyana HOM05D005606 ORTHO05D006446 1.2e-86 323.9 280 60.4
Manes.15G103000 Manihot esculenta HOM05D005606 ORTHO05D006446 2.0e-86 323.2 281 63.0
Prupe.4G086400 Prunus persica HOM05D005606 ORTHO05D006446 4.5e-86 322.0 281 63.0
MD05G1278400 Malus domestica HOM05D005606 ORTHO05D006446 5.9e-86 321.6 269 63.9
PSO782G3878 Papaver somniferum HOM05D005606 ORTHO05D006446 1.3e-85 320.5 280 59.3
CANSAT35G0050 Cannabis sativa HOM05D005606 ORTHO05D006446 2.9e-85 319.3 281 61.6
PGSC0003DMG400025630 Solanum tuberosum HOM05D005606 ORTHO05D006446 2.9e-85 319.3 281 61.2
MD10G1257000 Malus domestica HOM05D005606 ORTHO05D006446 2.5e-84 316.2 268 63.4
Eucgr.K02306 Eucalyptus grandis HOM05D005606 ORTHO05D006446 3.2e-84 315.8 281 60.1
SGA_v2.0_scaffold90G27762 Striga asiatica HOM05D005606 ORTHO05D006446 3.2e-84 315.8 280 58.6
Cc04_g08790 Coffea canephora HOM05D005606 ORTHO05D006446 7.2e-84 314.7 281 59.4
Sopen03g029090 Solanum pennellii HOM05D005606 ORTHO05D006446 9.4e-84 314.3 281 60.9
Cpa.g.sc111.40 Carica papaya HOM05D005606 ORTHO05D006446 1.2e-83 313.9 281 61.2
Solyc03g098340.4 Solanum lycopersicum HOM05D005606 ORTHO05D006446 1.2e-83 313.9 281 60.5
Aqoxy3G04204 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 3.6e-83 312.4 280 58.6
CSS0018749 Camellia sinensis var. sinensis HOM05D005606 ORTHO05D006446 3.6e-83 312.4 282 61.7
Gohir.A08G038700 Gossypium hirsutum HOM05D005606 ORTHO05D006446 8.0e-83 311.2 281 59.8
Gorai.004G048400 Gossypium raimondii HOM05D005606 ORTHO05D006446 8.0e-83 311.2 281 59.8
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.2e-81 307.4 281 59.8
Gohir.D08G048900 Gossypium hirsutum HOM05D005606 ORTHO05D006446 5.7e-81 305.1 281 59.1
Cfa000886 Carpinus fangiana HOM05D005606 ORTHO05D006446 7.5e-81 304.7 287 61.0
Duzib211G0450 Durio zibethinus HOM05D005606 ORTHO05D006446 9.7e-81 304.3 281 58.0
Lalb_Chr20g0117701 Lupinus albus HOM05D005606 ORTHO05D006446 1.3e-80 303.9 281 60.1
Rhsim08G0124400 Rhododendron simsii HOM05D005606 ORTHO05D006446 3.7e-80 302.4 269 59.9
MSTRG.11550 Avicennia marina HOM05D005606 ORTHO05D006446 2.4e-79 299.7 280 56.8
Lj6g0007906 Lotus japonicus HOM05D005606 ORTHO05D006446 2.4e-79 299.7 281 59.8
Sed0002755 Sechium edule HOM05D005606 ORTHO05D006446 4.1e-79 298.9 281 58.4
arahy.Tifrunner.gnm1.ann1.P0FE7Q Arachis hypogaea HOM05D005606 ORTHO05D006446 2.0e-78 296.6 281 58.0
MELO3C007099.2 Cucumis melo HOM05D005606 ORTHO05D006446 7.7e-78 294.7 281 57.7
Psat1g191760 Pisum sativum HOM05D005606 ORTHO05D006446 1.0e-77 294.3 281 57.7
Glyma.15G091800 Glycine max HOM05D005606 ORTHO05D006446 1.3e-77 293.9 281 57.7
arahy.Tifrunner.gnm1.ann1.J0D3J2 Arachis hypogaea HOM05D005606 ORTHO05D006446 2.2e-77 293.1 281 57.7
arahy.Tifrunner.gnm1.ann1.XD6SW7 Arachis hypogaea HOM05D005606 ORTHO05D006446 2.2e-77 293.1 281 57.7
ClCG01G024960 Citrullus lanatus HOM05D005606 ORTHO05D006446 2.9e-77 292.7 281 57.7
CsaV3_6G052120 Cucumis sativus L. HOM05D005606 ORTHO05D006446 5.0e-77 292.0 281 57.3
Sed0004896 Sechium edule HOM05D005606 ORTHO05D006446 5.0e-77 292.0 281 57.3
Oeu023545.1 Olea europaea HOM05D005606 ORTHO05D006446 8.5e-77 291.2 280 57.5
arahy.Tifrunner.gnm1.ann1.KIB2TD Arachis hypogaea HOM05D000001 ORTHO05D006446 1.1e-76 290.8 281 57.3
Medtr2g018830 Medicago truncatula HOM05D005606 ORTHO05D006446 5.5e-76 288.5 281 57.7
Ca_00517_v3 Cicer arietinum L. HOM05D005606 ORTHO05D006446 9.4e-76 287.7 281 55.5
PGR044G1587 Punica granatum HOM05D005606 ORTHO05D006446 2.1e-75 286.6 282 57.4
Glyma.13G220600 Glycine max HOM05D005606 ORTHO05D006446 2.7e-75 286.2 282 57.1
Migut.O00253 Erythranthe guttata HOM05D005606 ORTHO05D006446 1.0e-74 284.3 281 54.8
CDE04G0503 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 6.8e-74 281.6 280 52.9
THA.LOC104810627 Tarenaya hassleriana HOM05D005606 ORTHO05D006446 1.2e-73 280.8 281 55.9
VMungo0540G1265 Vigna mungo HOM05D005606 ORTHO05D006446 1.2e-73 280.8 281 56.2
Thhalv10018404m.g Eutrema salsugineum HOM05D005606 ORTHO05D006446 3.4e-73 279.3 283 55.1
Oeu038484.2 Olea europaea HOM05D005606 ORTHO05D006446 7.5e-73 278.1 317 50.2
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 9.8e-73 277.7 283 55.5
Peaxi162Scf00171g00427 Petunia axillaris HOM05D005606 ORTHO05D006446 9.8e-73 277.7 230 63.5
Phvul.006G167500 Phaseolus vulgaris HOM05D005606 ORTHO05D006446 9.8e-73 277.7 281 54.4
AL2G33010 Arabidopsis lyrata HOM05D005606 ORTHO05D006446 1.3e-72 277.3 283 55.1
Sp5g28210 Schrenkiella parvula HOM05D005606 ORTHO05D006446 1.7e-72 276.9 283 54.4
AT1G73240 Arabidopsis thaliana HOM05D005606 ORTHO05D006446 4.8e-72 275.4 283 54.8
Carub.0002s2004 Capsella rubella HOM05D005606 ORTHO05D006446 4.8e-72 275.4 283 54.4
AUR62041591 Chenopodium quinoa HOM05D005606 ORTHO05D006446 8.3e-72 274.6 281 54.4
DCAR_010217 Daucus carota HOM05D005606 ORTHO05D006446 7.0e-71 271.6 281 54.4
CARHR066250 Cardamine hirsuta HOM05D005606 ORTHO05D006446 9.1e-71 271.2 283 53.7
CDE02G0130 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 2.0e-70 270.0 280 52.5
EL10Ac8g19487 Beta vulgaris HOM05D005606 ORTHO05D006446 4.5e-70 268.9 281 52.0
QL05p054675 Quercus lobata HOM05D005606 ORTHO05D006446 1.0e-69 267.7 420 43.3
Hund06728 Selenicereus undatus HOM05D005606 ORTHO05D006446 2.9e-69 266.2 281 53.7
Lsat_1_v5_gn_8_221 Lactuca sativa HOM05D005606 ORTHO05D006446 8.6e-69 264.6 283 54.1
Aa31LG4G3530 Aethionema arabicum HOM05D005606 ORTHO05D006446 1.9e-68 263.5 283 53.4
BcaC08g46742 Brassica carinata HOM05D005606 ORTHO05D006446 3.6e-67 259.2 283 51.6
C06p47380 Brassica napus HOM05D005606 ORTHO05D006446 3.6e-67 259.2 283 51.6
BolC6t39777H Brassica oleracea HOM05D005606 ORTHO05D006446 3.6e-67 259.2 283 51.6
BraA07t31468Z Brassica rapa HOM05D005606 ORTHO05D006446 3.6e-67 259.2 283 51.6
SEGI_11499 Sequoiadendron giganteum HOM05D005606 ORTHO05D006446 3.6e-67 259.2 281 48.8
A07p39190 Brassica napus HOM05D005606 ORTHO05D006446 1.8e-66 256.9 283 51.2
Medtr8g007580 Medicago truncatula HOM05D005606 ORTHO05D006446 5.2e-66 255.4 276 52.5
BcaB03g15036 Brassica carinata HOM05D005606 ORTHO05D006446 6.8e-66 255.0 283 50.9
TAR629G2351 Trochodendron aralioides HOM05D005606 ORTHO05D006446 8.9e-66 254.6 213 66.2
Medtr8g008810 Medicago truncatula HOM05D005606 ORTHO05D006446 1.5e-65 253.8 236 58.1
Sc04g0004710 Simmondsia chinensis HOM05D005606 ORTHO05D006446 8.3e-64 248.1 282 50.4
HanXRQChr05g0141141 Helianthus annuus HOM05D005606 ORTHO05D006446 2.4e-63 246.5 280 49.3
Nitab4.5_0004612g0090 Nicotiana tabacum HOM05D005606 ORTHO05D006446 2.9e-56 223.0 285 49.1
vmacro17739 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 3.2e-55 219.5 213 54.5
TPR.G7652 Trifolium pratense HOM05D005606 ORTHO05D006446 1.7e-53 213.8 213 55.4
Zm00001eb250810 Zea mays HOM05D005606 ORTHO05D006446 3.0e-53 213.0 280 43.6
Lj9C350G3 Lonicera japonica HOM05D005606 ORTHO05D006446 3.9e-53 212.6 281 45.6
MBI06_g43804_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 1.8e-50 203.8 213 52.6
AagrBONN_evm.TU.Sc2ySwM_228.2052 Anthoceros agrestis HOM05D005606 ORTHO05D006446 3.4e-49 199.5 285 41.1
ATR0824G067 Amborella trichopoda HOM05D005606 ORTHO05D006446 5.8e-49 198.7 213 50.7
ATR0879G001 Amborella trichopoda HOM05D005606 ORTHO05D006446 1.3e-48 197.6 213 50.2
AUR62042457 Chenopodium quinoa HOM05D005606 ORTHO05D006446 1.2e-46 191.0 213 51.2
Hma1.2p1_0403F.1_g145180 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 2.3e-45 186.8 169 58.6
Pp3c23_16320 Physcomitrium patens HOM05D005606 ORTHO05D006446 1.6e-43 180.6 243 44.9
Mapoly0061s0120 Marchantia polymorpha HOM05D005606 ORTHO05D006446 9.9e-41 171.4 249 43.0
Os02g0684300 Oryza sativa ssp. japonica HOM05D005606 ORTHO05D006446 1.7e-40 170.6 172 51.2
Zm00001eb187400 Zea mays HOM05D005606 ORTHO05D006446 1.9e-39 167.2 235 40.9
MBI06_g39886_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 2.4e-39 166.8 191 49.7
SMO358G0536 Selaginella moellendorffii HOM05D005606 ORTHO05D006446 4.1e-39 166.0 286 39.5
ECA233G5513 Erigeron canadensis HOM05D005606 ORTHO05D006446 1.3e-37 161.0 275 40.0
CBR_g11193 Chara braunii HOM05D005606 ORTHO05D006446 1.6e-27 127.5 239 38.9
MBI06_g21907_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 2.1e-27 127.1 174 47.7
Nitab4.5_0001180g0240 Nicotiana tabacum HOM05D005606 ORTHO05D006446 6.2e-27 125.6 291 33.7
unitig_750.g28452 Utricularia gibba HOM05D005606 ORTHO05D006446 1.5e-17 94.4 158 39.2
ATR0824G212 Amborella trichopoda HOM05D005606 ORTHO05D006446 4.9e-16 89.4 68 61.8
vmacro17738 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 1.4e-15 87.8 69 68.1
Hma1.2p1_0403F.1_g145190 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 9.3e-15 85.1 69 62.3
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 3.5e-14 83.2 68 60.3
Medtr0199s0020 Medicago truncatula HOM05D005606 ORTHO05D006446 6.0e-14 82.4 113 46.0
Haze_05701 Corylus avellana HOM05D005606 ORTHO05D006446 2.3e-13 80.5 67 59.7
Aqoxy3G04211 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 2.8e-11 73.6 112 42.0
Ah.15g099030 Amaranthus hybridus HOM05D002838 ORTHO05D002114 1.1e-10 71.6 97 47.4
Medtr8g008813 Medicago truncatula HOM05D005606 ORTHO05D006446 3.5e-06 56.6 45 66.7


User provided reference genes

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