Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 5.6e-79 297.7 172 100.0
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 4.6e-57 224.9 174 78.2
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.1e-50 203.8 174 70.7
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 3.9e-32 142.1 180 55.6
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 1.9e-31 139.8 176 60.2
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 3.3e-31 139.0 173 51.4
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 1.4e-29 133.7 179 51.4
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 4.1e-29 132.1 186 50.0
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 6.9e-29 131.3 175 52.0
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 9.0e-29 131.0 179 51.4
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 2.0e-28 129.8 185 51.9
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 1.0e-27 127.5 178 50.6
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 1.3e-27 127.1 177 49.7
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 2.2e-27 126.3 175 49.7
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 1.1e-26 124.0 178 51.1
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 1.4e-26 123.6 118 61.0
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 4.2e-26 122.1 177 51.4
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 9.3e-26 120.9 177 49.2
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.2e-25 120.6 135 56.3
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 1.2e-25 120.6 181 47.5
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 1.6e-25 120.2 173 46.2
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 1.6e-25 120.2 115 61.7
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 2.1e-25 119.8 175 51.4
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 2.7e-25 119.4 176 50.6
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 4.6e-25 118.6 172 49.4
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 6.1e-25 118.2 104 64.4
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 6.1e-25 118.2 189 43.9
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 1.3e-24 117.1 191 45.0
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 1.8e-24 116.7 176 44.9
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 2.3e-24 116.3 171 51.5
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 3.0e-24 115.9 181 46.4
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 3.9e-24 115.5 174 52.9
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 3.9e-24 115.5 123 55.3
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 5.1e-24 115.2 162 47.5
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 5.1e-24 115.2 171 48.0
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 6.7e-24 114.8 170 50.0
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 8.7e-24 114.4 168 48.8
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 1.5e-23 113.6 193 44.6
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 1.9e-23 113.2 175 47.4
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 3.3e-23 112.5 170 44.7
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 4.3e-23 112.1 190 42.1
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 4.3e-23 112.1 179 46.9
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 4.3e-23 112.1 176 49.4
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.3e-22 110.5 177 49.7
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 1.3e-22 110.5 115 58.3
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.3e-22 110.5 177 45.2
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 2.8e-22 109.4 118 55.9
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 3.7e-22 109.0 178 48.3
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 8.2e-22 107.8 158 49.4
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 8.2e-22 107.8 163 49.1
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 8.2e-22 107.8 169 46.7
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 1.4e-21 107.1 188 42.0
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 2.4e-21 106.3 172 45.3
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 2.4e-21 106.3 134 51.5
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 3.1e-21 105.9 124 51.6
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 3.1e-21 105.9 172 47.7
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 3.1e-21 105.9 181 44.8
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 3.1e-21 105.9 190 46.8
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 6.9e-21 104.8 175 45.1
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 6.9e-21 104.8 121 56.2
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 9.1e-21 104.4 171 47.4
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 1.5e-20 103.6 176 46.0
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 1.5e-20 103.6 173 44.5
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 2.0e-20 103.2 175 42.9
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 2.0e-20 103.2 184 43.5
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.0e-20 103.2 169 47.9
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 2.0e-20 103.2 93 61.3
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 2.0e-20 103.2 180 43.3
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 4.5e-20 102.1 172 44.2
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 5.9e-20 101.7 116 56.0
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.0e-19 100.9 171 46.8
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.7e-19 100.1 169 43.8
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 3.8e-19 99.0 174 42.5
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 3.8e-19 99.0 170 42.9
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 5.0e-19 98.6 173 46.2
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 8.5e-19 97.8 97 59.8
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 8.5e-19 97.8 167 43.7
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 1.1e-18 97.4 169 49.1
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 1.4e-18 97.1 175 44.6
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 1.4e-18 97.1 161 45.3
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 4.2e-18 95.5 175 44.6
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 4.2e-18 95.5 175 44.6
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 9.4e-18 94.4 175 44.0
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 2.7e-17 92.8 173 43.4
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 6.1e-17 91.7 154 50.0
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 7.9e-17 91.3 175 43.4
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.4e-16 90.5 174 42.0
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 5.1e-16 88.6 170 41.8
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 5.1e-16 88.6 129 46.5
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 5.1e-16 88.6 111 55.9
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 1.1e-15 87.4 139 46.0
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 1.5e-15 87.0 104 56.7
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 2.0e-15 86.7 164 43.9
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 2.6e-15 86.3 102 55.9
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 5.7e-15 85.1 163 41.1
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 3.7e-14 82.4 83 56.6
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 4.8e-14 82.0 78 62.8
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 4.1e-13 79.0 182 36.3
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 5.3e-13 78.6 87 54.0
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 9.1e-13 77.8 154 46.8
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.2e-12 77.4 157 43.9
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 2.6e-12 76.3 96 50.0
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.0e-11 74.3 164 40.2
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 1.3e-11 73.9 168 38.1
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 1.7e-11 73.6 146 46.6
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 5.0e-11 72.0 57 61.4
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 5.0e-11 72.0 155 49.0
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 3.9e-08 62.4 76 56.6
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 8.8e-08 61.2 79 51.9
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 8.8e-08 61.2 102 43.1
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 1.1e-07 60.8 94 48.9
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.0e-07 60.1 94 40.4


User provided reference genes

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