Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.0e-242 842.0 424 100.0
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 5.6e-165 584.7 423 72.8
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 4.3e-157 558.5 425 69.6
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 4.8e-140 501.9 432 61.6
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.4e-139 500.4 435 60.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 1.8e-139 500.0 429 60.6
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 6.9e-139 498.0 428 59.8
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 5.5e-136 488.4 412 60.9
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 3.9e-134 482.3 428 58.9
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 6.7e-134 481.5 422 60.7
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 6.7e-134 481.5 432 60.2
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 3.3e-133 479.2 424 60.6
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 7.4e-133 478.0 428 58.6
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.3e-132 477.2 428 58.2
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.1e-131 474.2 423 59.3
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 5.3e-131 471.9 432 57.6
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.5e-130 470.3 414 60.9
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.5e-130 470.3 418 58.4
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.0e-130 469.9 418 58.4
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 5.9e-130 468.4 433 57.5
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 5.9e-130 468.4 421 59.9
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 7.7e-130 468.0 399 63.2
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 2.2e-129 466.5 372 64.0
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 6.5e-129 464.9 418 57.7
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 8.5e-129 464.5 418 57.7
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.4e-128 463.8 406 59.6
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 4.2e-128 462.2 409 60.4
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 7.2e-128 461.5 424 57.5
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.7e-127 459.5 375 62.7
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 1.4e-126 457.2 403 59.6
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.1e-125 454.1 429 57.6
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 8.2e-124 448.0 434 55.8
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.1e-123 447.6 420 58.3
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.4e-123 447.2 408 58.3
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.8e-123 446.8 411 58.2
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 3.1e-123 446.0 425 57.9
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 4.1e-123 445.7 389 60.4
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 5.9e-122 441.8 372 60.8
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 5.9e-122 441.8 409 57.5
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 5.9e-122 441.8 413 57.4
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 7.7e-122 441.4 376 60.9
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 1.7e-121 440.3 430 55.3
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 2.2e-121 439.9 376 60.4
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 8.5e-121 438.0 393 58.8
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.5e-120 436.4 372 59.9
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.8e-118 430.3 396 58.6
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.3e-116 424.1 426 54.7
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 8.2e-116 421.4 372 58.1
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.1e-115 421.0 372 58.1
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 5.9e-114 415.2 372 57.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 1.7e-113 413.7 379 57.5
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.9e-113 412.9 376 58.2
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 3.8e-113 412.5 379 57.5
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 5.0e-113 412.1 423 53.9
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.1e-112 411.0 377 57.8
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 2.5e-112 409.8 432 53.0
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 3.6e-111 406.0 413 53.5
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.6e-111 406.0 423 53.4
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 2.3e-110 403.3 422 52.1
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.3e-110 403.3 340 58.5
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.0e-110 402.5 422 53.1
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 2.6e-109 399.8 373 55.8
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 6.3e-108 395.2 370 56.8
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 7.0e-107 391.7 420 51.7
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 9.1e-107 391.3 382 55.8
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.2e-106 391.0 389 54.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 6.1e-103 378.6 419 50.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 1.5e-101 374.0 427 51.3
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.7e-100 369.4 425 51.1
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 3.1e-99 366.3 420 49.8
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 2.0e-98 363.6 377 51.5
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 1.9e-96 357.1 377 51.5
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 7.3e-96 355.1 452 46.7
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.3e-94 350.1 350 52.6
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.1e-87 327.0 389 48.8
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 4.0e-86 322.8 266 61.7
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 1.2e-85 321.2 299 58.5
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 4.4e-85 319.3 276 58.7
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 5.8e-85 318.9 383 47.5
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.2e-79 301.2 307 52.1
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.9e-67 260.8 268 54.5
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 1.7e-60 237.7 271 52.4
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.9e-56 224.2 409 36.4
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 4.6e-50 203.0 239 48.5
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.3e-47 194.9 374 35.6
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 1.4e-46 191.4 430 31.9
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 8.4e-44 182.2 170 58.2
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 6.0e-42 176.0 214 47.2
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 2.2e-31 141.0 155 51.6
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.9e-27 127.9 166 47.6
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.8e-23 113.2 129 48.8
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 4.1e-14 83.6 76 52.6
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 2.7e-10 70.9 358 25.1
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.3e-09 67.8 62 58.1
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 5.2e-09 66.6 81 43.2
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 3.3e-08 63.9 390 24.1
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 4.4e-08 63.5 264 26.1
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.8e-06 58.2 402 23.4
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.3e-06 56.6 401 22.9


User provided reference genes

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