Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.1e-106 390.2 233 100.0
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 7.1e-69 264.6 251 72.5
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.4e-63 245.7 241 71.4
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 6.7e-43 178.3 250 53.2
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.9e-42 176.8 253 55.3
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 1.3e-41 174.1 254 53.5
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.8e-40 170.2 254 51.6
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 2.4e-40 169.9 258 54.3
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 3.4e-39 166.0 259 49.4
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 3.8e-38 162.5 227 50.2
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.9e-37 160.2 240 54.2
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 2.7e-36 156.4 240 45.8
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.0e-35 154.5 232 46.6
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 5.1e-35 152.1 213 51.2
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 8.7e-35 151.4 189 54.5
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 1.1e-34 151.0 250 46.8
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 2.5e-34 149.8 168 53.0
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 4.3e-34 149.1 224 54.5
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 7.4e-34 148.3 207 50.7
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.7e-33 147.1 245 44.1
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 1.7e-33 147.1 250 45.6
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.8e-33 146.4 240 45.8
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 4.8e-33 145.6 260 44.2
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 8.2e-33 144.8 215 49.8
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 2.4e-32 143.3 223 49.3
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 3.1e-32 142.9 123 65.0
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 6.9e-32 141.7 236 49.6
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 6.9e-32 141.7 193 51.8
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 6.9e-32 141.7 177 58.2
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 9.1e-32 141.4 182 50.0
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.5e-31 140.6 255 44.7
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 7.7e-31 138.3 198 46.5
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 7.7e-31 138.3 239 44.4
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 1.0e-30 137.9 215 43.7
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.3e-30 137.5 227 43.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.7e-30 137.1 154 62.3
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.7e-30 137.1 186 51.6
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 2.9e-30 136.3 253 44.7
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 3.8e-30 136.0 226 50.4
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 5.0e-30 135.6 157 56.7
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 6.5e-30 135.2 228 43.4
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 1.1e-29 134.4 188 54.8
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.4e-29 134.0 224 48.7
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 2.5e-29 133.3 198 50.5
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 3.2e-29 132.9 204 46.6
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 3.2e-29 132.9 199 50.3
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 4.2e-29 132.5 181 55.2
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 4.2e-29 132.5 208 46.2
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 4.2e-29 132.5 198 50.5
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 4.2e-29 132.5 205 49.8
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 5.5e-29 132.1 209 45.0
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 9.4e-29 131.3 260 44.2
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.2e-28 131.0 191 47.6
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 2.1e-28 130.2 141 55.3
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 2.7e-28 129.8 210 51.0
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 3.6e-28 129.4 226 43.4
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 3.6e-28 129.4 215 48.8
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 4.7e-28 129.0 199 47.2
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 4.7e-28 129.0 195 45.6
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 6.1e-28 128.6 210 50.0
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 7.9e-28 128.3 206 43.2
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 1.0e-27 127.9 216 44.4
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 1.4e-27 127.5 216 44.9
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.8e-27 127.1 208 48.1
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 1.8e-27 127.1 253 39.1
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.3e-27 126.7 217 45.6
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 3.0e-27 126.3 210 48.6
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 3.9e-27 125.9 218 45.0
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 6.7e-27 125.2 222 43.2
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 8.8e-27 124.8 223 47.1
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 8.8e-27 124.8 196 49.0
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 8.8e-27 124.8 193 49.2
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 1.5e-26 124.0 159 47.2
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 4.4e-26 122.5 203 44.3
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 4.4e-26 122.5 238 45.0
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 5.7e-26 122.1 237 43.0
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 5.7e-26 122.1 229 43.7
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 1.3e-25 120.9 156 61.5
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 1.3e-25 120.9 158 48.7
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.3e-25 120.9 186 43.5
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 6.3e-25 118.6 166 56.0
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 6.3e-25 118.6 210 43.8
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.1e-24 117.9 189 47.6
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.1e-24 115.9 201 51.7
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 4.1e-24 115.9 166 47.6
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 6.9e-24 115.2 211 42.2
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 9.1e-24 114.8 189 54.5
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 9.1e-24 114.8 191 47.1
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 9.1e-24 114.8 197 42.1
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 4.5e-23 112.5 179 50.8
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 7.7e-23 111.7 108 60.2
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.3e-22 110.9 191 45.5
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 8.5e-22 108.2 297 35.0
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 8.0e-20 101.7 161 49.1
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 1.4e-19 100.9 141 57.4
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 1.8e-19 100.5 134 49.3
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.3e-19 100.1 118 55.9
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 2.6e-18 96.7 107 61.7
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 3.3e-18 96.3 167 38.9
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.7e-17 94.0 239 42.3
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 2.4e-16 90.1 139 46.0
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 4.1e-16 89.4 225 34.7
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.6e-15 87.4 166 44.0
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.6e-15 86.7 286 35.0
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 3.5e-15 86.3 163 45.4
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 5.9e-15 85.5 191 41.4
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 3.8e-14 82.8 102 45.1
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 2.1e-12 77.0 206 39.8
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 8.0e-12 75.1 119 44.5
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 1.0e-11 74.7 75 53.3
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 5.2e-11 72.4 115 54.8
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 6.3e-09 65.5 108 39.8
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 4.1e-08 62.8 34 82.4
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 1.6e-07 60.8 223 30.9
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 2.0e-07 60.5 105 37.1
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 4.5e-07 59.3 51 52.9
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.0e-06 58.2 41 68.3
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 2.9e-06 56.6 188 27.7
Ah.05g171290 Amaranthus hybridus HOM05D005915 ORTHO05D007239 5.0e-06 55.8 90 44.4
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 5.0e-06 55.8 62 54.8


User provided reference genes

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