Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.9e-49 198.7 92 100.0
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 5.5e-49 197.2 92 97.8
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 6.1e-48 193.7 92 96.7
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.0e-47 193.0 90 97.8
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 1.5e-46 189.1 92 94.6
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 3.7e-45 184.5 92 91.3
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 2.6e-43 178.3 92 88.0
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.0e-42 176.4 87 90.8
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.0e-42 176.4 87 90.8
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.3e-42 176.0 92 87.0
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.3e-42 176.0 92 87.0
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.3e-42 176.0 87 90.8
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 1.7e-42 175.6 87 90.8
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 2.9e-42 174.9 92 85.9
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 2.9e-42 174.9 85 91.8
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 6.5e-42 173.7 92 87.0
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 6.5e-42 173.7 92 84.8
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 3.2e-41 171.4 87 86.2
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 4.2e-41 171.0 87 88.5
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 4.2e-41 171.0 87 87.4
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 5.5e-41 170.6 87 86.2
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.6e-40 169.1 92 83.7
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 1.6e-40 169.1 85 87.1
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 2.1e-40 168.7 88 84.1
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 2.1e-40 168.7 92 83.7
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 2.7e-40 168.3 92 82.6
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 3.6e-40 167.9 87 87.4
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 3.6e-40 167.9 86 87.2
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 4.7e-40 167.5 87 86.2
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.7e-40 167.5 92 83.7
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 6.1e-40 167.2 86 86.0
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.1e-40 167.2 89 85.4
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.1e-40 167.2 89 85.4
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 6.1e-40 167.2 89 85.4
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 7.9e-40 166.8 85 84.7
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 7.9e-40 166.8 92 81.5
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.0e-39 166.4 92 82.6
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 1.0e-39 166.4 85 89.4
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 1.4e-39 166.0 86 86.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.8e-39 165.6 89 84.3
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 1.8e-39 165.6 87 82.8
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 2.3e-39 165.2 85 87.1
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 3.0e-39 164.9 87 83.9
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 3.9e-39 164.5 84 85.7
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 3.9e-39 164.5 86 86.0
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 8.8e-39 163.3 87 82.8
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.1e-38 162.9 85 84.7
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 2.6e-38 161.8 92 78.3
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 2.6e-38 161.8 84 85.7
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 3.3e-38 161.4 92 79.3
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 3.3e-38 161.4 89 82.0
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 81.4
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 7.4e-38 160.2 84 83.3
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 1.3e-37 159.5 86 81.4
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.3e-37 159.5 86 81.4
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.3e-37 159.5 86 81.4
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.3e-37 159.5 86 81.4
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 2.2e-37 158.7 82 86.6
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 2.2e-37 158.7 86 81.4
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 80.0
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 2.8e-37 158.3 84 86.9
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 3.7e-37 157.9 85 83.5
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 4.8e-37 157.5 84 82.1
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 4.8e-37 157.5 84 82.1
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 4.8e-37 157.5 86 76.7
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 4.8e-37 157.5 87 79.3
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 6.3e-37 157.1 85 80.0
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 8.2e-37 156.8 83 81.9
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.1e-36 156.4 86 77.9
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.4e-36 156.0 86 80.2
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.4e-36 156.0 83 85.5
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.4e-36 156.0 83 85.5
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 1.8e-36 155.6 86 79.1
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 3.1e-36 154.8 91 74.7
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 3.1e-36 154.8 90 75.6
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.1e-36 154.8 86 79.1
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.1e-36 154.8 86 79.1
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 4.1e-36 154.5 87 77.0
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 4.1e-36 154.5 84 79.8
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 4.1e-36 154.5 84 79.8
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 7.0e-36 153.7 90 74.4
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 7.0e-36 153.7 90 74.4
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.2e-35 152.9 81 82.7
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.2e-35 152.9 88 77.3
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.6e-35 152.5 81 85.2
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.0e-35 152.1 83 79.5
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.5e-35 151.4 82 80.5
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 4.5e-35 151.0 87 75.9
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 77.6
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 77.6
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 77.6
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 77.6
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 1.3e-34 149.4 81 79.0
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 76.5
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 76.5
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 78.8
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 76.5
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 76.5
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 76.5
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 76.5
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 76.5
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 1.2e-32 142.9 72 87.5
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 2.7e-32 141.7 83 78.3
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 8.0e-32 140.2 85 76.5
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 1.4e-31 139.4 85 72.9
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 8.8e-31 136.7 81 71.6
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 2.6e-30 135.2 83 69.9
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 3.3e-30 134.8 90 66.7
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 4.4e-30 134.4 90 67.8
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 9.7e-30 133.3 84 70.2
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 2.2e-29 132.1 86 68.6
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 8.2e-29 130.2 84 69.0
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 1.8e-28 129.0 84 69.0
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.4e-28 128.6 87 67.8
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 7.0e-28 127.1 72 72.2
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 3.8e-26 121.3 87 62.1
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.2e-23 110.9 70 72.9
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.2e-23 110.9 70 72.9
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 1.1e-20 103.2 84 51.2
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.4e-20 100.9 53 77.4
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 2.7e-19 98.6 82 50.0
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 6.5e-18 94.0 78 52.6
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 3.0e-15 85.1 78 46.2
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 8.8e-15 83.6 85 43.5
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 2.6e-14 82.0 70 54.3
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.7e-10 69.3 41 80.5
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 6.6e-10 67.4 86 46.5
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 1.5e-06 56.2 56 50.0
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 4.4e-06 54.7 36 72.2
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 7.5e-06 53.9 36 69.4


User provided reference genes

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