Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G172701 Populus trichocarpa HOM05D026445 ORTHO05D332899 7.6e-161 570.5 295 100.0
Potri.003G172800 Populus trichocarpa HOM05D026445 ORTHO05D001610 2.3e-112 409.5 326 70.9
Potri.003G172866 Populus trichocarpa HOM05D001235 ORTHO05D001610 8.2e-46 188.3 410 37.8
Potri.001G050800 Populus trichocarpa HOM05D001235 ORTHO05D001610 8.5e-19 98.6 94 60.6
Sabra03G0130000 Salix brachista HOM05D001235 ORTHO05D001610 2.1e-17 94.0 107 48.6
Potri.003G177300 Populus trichocarpa HOM05D001235 ORTHO05D001610 1.0e-16 91.7 108 50.9
Sabra03G0129900 Salix brachista HOM05D001235 ORTHO05D001610 1.4e-16 91.3 108 50.0
Sabra01G0055500 Salix brachista HOM05D001638 ORTHO05D003216 4.0e-16 89.7 69 71.0
Sabra03G0104500 Salix brachista HOM05D001638 ORTHO05D003216 4.0e-16 89.7 69 71.0
Sabra08G0062700 Salix brachista HOM05D001638 ORTHO05D003216 4.0e-16 89.7 69 71.0
Sabra17G0004200 Salix brachista HOM05D001638 ORTHO05D003216 4.0e-16 89.7 69 71.0
Potri.003G177400 Populus trichocarpa HOM05D001235 ORTHO05D001610 7.5e-15 85.5 126 44.4
Manes.16G099400 Manihot esculenta HOM05D001468 ORTHO05D001404 1.0e-08 65.1 92 40.2
Gohir.A07G012900 Gossypium hirsutum HOM05D001468 ORTHO05D001404 3.0e-08 63.5 93 40.9
Potri.001G055650 Populus trichocarpa HOM05D026445 ORTHO05D332007 6.8e-08 62.4 170 31.8
Thecc.09G083600 Theobroma cacao HOM05D001468 ORTHO05D001404 6.8e-08 62.4 93 39.8
Gohir.D07G012700 Gossypium hirsutum HOM05D001468 ORTHO05D001404 8.8e-08 62.0 93 39.8
Gorai.001G013400 Gossypium raimondii HOM05D001468 ORTHO05D001404 8.8e-08 62.0 93 39.8
Manes.03G036800 Manihot esculenta HOM05D001468 ORTHO05D001404 1.5e-07 61.2 92 41.3
TWI32G1015 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 2.6e-07 60.5 94 38.3
MD02G1084500 Malus domestica HOM05D001468 ORTHO05D001404 2.2e-06 57.4 81 43.2
Gohir.A05G031800 Gossypium hirsutum HOM05D001468 ORTHO05D001404 3.7e-06 56.6 95 36.8
Gohir.A06G074000 Gossypium hirsutum HOM05D001468 ORTHO05D001404 3.7e-06 56.6 77 46.8
Sabra01G0035500 Salix brachista HOM05D001235 ORTHO05D001610 3.7e-06 56.6 310 25.5
Potri.006G146700 Populus trichocarpa HOM05D001468 ORTHO05D001404 4.8e-06 56.2 72 45.8
THA.LOC104814635 Tarenaya hassleriana HOM05D001468 ORTHO05D001404 4.8e-06 56.2 80 42.5
RcHm_v2.0_Chr2g0094041 Rosa chinensis HOM05D001468 ORTHO05D001404 6.3e-06 55.8 92 37.0


User provided reference genes

Program Settings