Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 3.1e-97 358.6 197 100.0
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 2.1e-74 282.7 195 76.9
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 3.3e-51 205.7 178 69.1
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 6.5e-47 191.4 182 63.7
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 8.7e-36 154.5 187 50.8
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 4.3e-35 152.1 204 49.5
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 9.7e-35 151.0 194 47.9
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 1.6e-34 150.2 197 46.7
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.7e-31 140.2 211 42.2
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 2.2e-31 139.8 207 45.9
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 6.5e-31 138.3 181 50.3
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 8.5e-31 137.9 212 41.5
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 1.1e-30 137.5 206 44.7
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.9e-30 136.7 211 41.2
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 5.5e-30 135.2 206 44.2
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 2.7e-29 132.9 207 43.0
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 6.1e-29 131.7 203 43.3
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 8.8e-28 127.9 192 44.3
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 8.8e-28 127.9 195 42.1
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 1.1e-27 127.5 197 42.6
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 4.3e-27 125.6 198 44.4
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.3e-26 124.0 204 42.2
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 1.7e-26 123.6 162 42.0
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 4.8e-26 122.1 199 39.2
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 8.2e-26 121.3 198 42.9
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.4e-25 119.8 179 46.4
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 5.3e-25 118.6 199 42.7
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 6.9e-25 118.2 157 45.9
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 1.2e-24 117.5 208 38.5
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.2e-24 117.5 201 39.8
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 2.6e-24 116.3 217 36.9
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 3.4e-24 115.9 219 39.3
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 4.5e-24 115.5 223 36.8
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.0e-23 114.4 167 40.7
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 1.0e-23 114.4 209 36.8
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 1.3e-23 114.0 198 40.4
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 2.2e-23 113.2 173 42.2
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 2.9e-23 112.8 208 38.9
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 2.9e-23 112.8 201 40.3
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 2.9e-23 112.8 193 41.5
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 3.8e-23 112.5 197 39.1
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 5.0e-23 112.1 219 34.7
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 5.0e-23 112.1 209 39.7
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 6.5e-23 111.7 215 36.7
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 1.4e-22 110.5 159 42.8
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 1.4e-22 110.5 159 42.8
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.4e-22 110.5 201 38.3
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 1.9e-22 110.2 161 42.9
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 7.2e-22 108.2 160 42.5
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 7.2e-22 108.2 196 37.8
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 9.4e-22 107.8 158 40.5
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 1.2e-21 107.5 200 35.5
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 1.6e-21 107.1 157 41.4
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.6e-21 107.1 194 39.7
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.6e-21 107.1 206 35.0
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 1.6e-21 107.1 203 37.9
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 2.1e-21 106.7 160 41.9
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 2.1e-21 106.7 157 41.4
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.1e-21 106.7 218 34.4
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.7e-21 106.3 97 58.8
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.7e-21 106.3 97 58.8
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.6e-21 105.9 200 40.5
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 4.7e-21 105.5 160 41.2
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.1e-21 105.1 193 39.4
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 7.9e-21 104.8 192 37.0
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 7.9e-21 104.8 157 40.1
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.4e-20 104.0 200 40.0
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.8e-20 103.6 193 39.9
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 2.3e-20 103.2 191 37.2
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 2.3e-20 103.2 207 35.3
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 3.9e-20 102.4 157 41.4
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 3.9e-20 102.4 202 37.6
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 5.1e-20 102.1 207 35.7
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 6.7e-20 101.7 153 43.8
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 1.1e-19 100.9 197 39.6
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 2.0e-19 100.1 151 44.4
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 3.3e-19 99.4 172 40.7
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 4.4e-19 99.0 159 39.0
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 5.7e-19 98.6 157 38.9
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 9.7e-19 97.8 158 39.2
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 1.3e-18 97.4 117 41.0
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 1.7e-18 97.1 111 50.5
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.4e-17 94.0 157 36.3
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 4.1e-17 92.4 193 36.3
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 5.3e-17 92.0 155 36.1
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 5.3e-17 92.0 183 34.4
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 7.0e-17 91.7 206 33.0
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 9.1e-17 91.3 196 33.2
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 1.2e-16 90.9 167 36.5
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.2e-16 90.9 195 34.4
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 1.5e-16 90.5 145 39.3
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 2.0e-16 90.1 158 38.0
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 2.6e-16 89.7 151 45.0
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 1.0e-15 87.8 198 32.8
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.7e-15 87.0 94 50.0
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 2.2e-15 86.7 175 34.3
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 6.5e-15 85.1 120 45.0
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 8.5e-15 84.7 155 37.4
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 8.5e-15 84.7 191 35.1
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 2.5e-14 83.2 199 33.7
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.5e-14 83.2 82 56.1
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 5.5e-14 82.0 200 35.5
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 7.2e-14 81.6 200 34.0
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 8.0e-13 78.2 189 32.8
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 8.0e-13 78.2 156 35.9
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.8e-12 77.0 61 57.4
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 3.9e-12 75.9 192 33.3
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 7.4e-11 71.6 61 57.4
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 2.8e-10 69.7 120 37.5
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 8.2e-10 68.2 213 30.0
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 2.6e-08 63.2 97 39.2


User provided reference genes

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