Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.5e-200 702.6 344 100.0
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.8e-178 628.6 343 88.9
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 1.7e-175 619.4 426 75.1
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 2.4e-158 562.4 354 81.1
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 7.8e-157 557.4 314 89.2
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 8.4e-151 537.3 351 78.1
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 3.2e-150 535.4 350 76.9
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.1e-149 532.7 346 78.6
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 6.0e-149 531.2 346 78.6
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 6.0e-149 531.2 346 78.9
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 1.7e-148 529.6 347 77.8
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.7e-148 529.6 355 75.8
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 2.3e-148 529.3 354 76.6
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 3.9e-148 528.5 354 76.8
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 1.9e-147 526.2 355 75.5
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.9e-147 526.2 355 75.5
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.5e-147 525.8 362 75.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.5e-147 525.8 351 77.2
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 9.6e-147 523.9 362 75.7
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 9.6e-147 523.9 359 75.2
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.3e-146 523.5 356 75.0
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.1e-146 522.7 356 74.7
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 2.8e-146 522.3 349 77.9
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 4.8e-146 521.5 359 73.0
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 6.2e-146 521.2 348 77.3
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 6.2e-146 521.2 364 73.4
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 8.1e-146 520.8 360 75.6
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.8e-145 519.6 360 75.3
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 2.0e-144 516.2 350 74.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.6e-144 515.8 355 75.2
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 9.9e-144 513.8 361 75.6
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.7e-143 513.1 352 74.7
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 2.2e-143 512.7 361 72.6
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.9e-143 511.5 346 74.3
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.1e-142 510.4 362 74.3
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.4e-142 510.0 349 75.9
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 2.4e-142 509.2 361 70.1
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 2.4e-142 509.2 353 75.1
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 4.2e-142 508.4 375 72.5
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 4.2e-142 508.4 375 72.5
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 4.2e-142 508.4 357 71.4
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.4e-142 508.1 362 73.5
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.4e-142 508.1 362 73.5
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 5.4e-142 508.1 349 74.8
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 5.4e-142 508.1 353 73.1
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 9.3e-142 507.3 361 74.2
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.6e-141 506.5 350 74.3
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.1e-141 506.1 363 71.1
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.1e-141 506.1 364 70.3
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 3.5e-141 505.4 361 70.4
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 4.6e-141 505.0 370 71.6
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.6e-141 505.0 345 73.9
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 6.0e-141 504.6 361 74.2
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 6.0e-141 504.6 357 72.0
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.7e-140 503.1 369 71.3
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.3e-140 502.7 354 73.4
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 3.0e-140 502.3 348 75.3
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 3.9e-140 501.9 360 70.3
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 5.1e-140 501.5 356 71.3
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 8.7e-140 500.7 361 69.3
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 8.7e-140 500.7 348 73.9
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.1e-139 500.4 361 69.5
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 1.5e-139 500.0 362 69.3
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 1.5e-139 500.0 364 72.0
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 3.3e-139 498.8 353 70.3
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 4.3e-139 498.4 354 69.8
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 5.6e-139 498.0 345 74.2
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 9.6e-139 497.3 358 70.4
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 2.1e-138 496.1 362 69.1
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 2.1e-138 496.1 362 69.1
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 3.6e-138 495.4 344 72.7
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 4.8e-138 495.0 345 73.9
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 6.2e-138 494.6 348 71.8
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 6.2e-138 494.6 358 70.9
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.2e-136 490.3 362 68.5
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.5e-136 490.0 353 70.5
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.5e-136 490.0 353 70.5
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.8e-136 488.0 314 77.4
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 7.6e-136 487.6 353 70.3
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 9.9e-136 487.3 344 71.5
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 6.4e-135 484.6 356 72.5
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 8.4e-135 484.2 342 71.6
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 3.2e-134 482.3 373 67.3
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.2e-134 481.9 346 73.4
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 1.6e-133 479.9 344 71.5
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 8.7e-132 474.2 346 70.5
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.9e-131 473.0 349 68.8
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 7.4e-131 471.1 328 75.3
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 9.6e-131 470.7 359 67.1
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 6.2e-130 468.0 352 69.0
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.1e-129 467.2 346 69.7
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 9.0e-129 464.2 348 69.5
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.2e-128 463.8 363 65.6
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 8.4e-127 457.6 348 67.8
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.1e-126 457.2 329 72.3
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 9.3e-126 454.1 352 66.5
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 3.5e-125 452.2 329 70.5
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.2e-120 437.2 359 64.3
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 2.6e-120 436.0 329 67.8
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 5.8e-120 434.9 345 65.2
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 6.5e-119 431.4 359 63.8
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 1.4e-118 430.3 371 62.3
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.9e-118 429.9 344 64.2
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 7.2e-118 427.9 345 64.3
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.2e-117 427.2 282 79.1
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 2.8e-114 416.0 281 76.5
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.0e-111 407.5 353 59.5
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.7e-111 406.8 345 60.3
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 8.8e-108 394.4 287 74.2
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.3e-107 392.1 346 59.5
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 5.3e-105 385.2 329 61.1
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 5.9e-104 381.7 297 64.0
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 5.0e-103 378.6 357 57.1
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 8.5e-103 377.9 314 63.4
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 2.0e-99 366.7 194 91.8
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.7e-98 363.6 228 79.4
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 6.3e-98 361.7 344 57.0
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 5.0e-95 352.1 194 86.1
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.9e-94 350.1 194 87.1
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.5e-94 349.7 302 59.6
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 1.2e-93 347.4 351 53.0
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.6e-93 347.1 283 61.8
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 3.0e-92 342.8 297 56.2
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 6.7e-92 341.7 349 52.1
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 6.7e-92 341.7 295 58.0
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 6.1e-69 265.4 153 81.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 5.6e-62 242.3 209 61.2
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.8e-59 232.3 126 85.7
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.2e-48 198.0 206 52.4
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.6e-45 187.6 100 87.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 1.4e-44 184.5 182 54.9
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.8e-43 179.1 91 89.0
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 4.7e-37 159.5 134 67.9
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.0e-31 140.2 136 54.4
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 8.7e-31 138.7 101 74.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.5e-30 137.9 91 75.8
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 3.6e-29 133.3 73 79.5
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 6.2e-29 132.5 73 79.5
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 2.0e-27 127.5 230 41.7
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.4e-27 126.7 155 48.4
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.9e-17 94.4 123 43.9
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 2.4e-12 77.4 43 83.7
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 5.1e-07 59.7 71 49.3


User provided reference genes

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