Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 6.2e-194 680.6 351 100.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 2.5e-182 642.1 352 90.6
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 2.0e-152 542.7 314 80.3
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 3.2e-150 535.4 315 81.9
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 5.5e-150 534.6 315 78.1
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 3.6e-149 531.9 314 79.0
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.0e-148 530.4 305 83.3
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.3e-148 529.3 310 81.3
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 3.0e-148 528.9 315 78.1
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 2.2e-146 522.7 315 77.8
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 2.8e-146 522.3 300 81.7
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.4e-145 520.0 317 78.2
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 1.8e-145 519.6 304 81.6
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 7.0e-145 517.7 315 77.5
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.7e-144 515.8 315 76.8
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 3.5e-144 515.4 312 78.2
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.0e-143 513.8 315 76.5
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.3e-143 512.7 304 78.9
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 2.3e-143 512.7 316 76.9
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.8e-143 511.9 315 76.8
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 4.2e-142 508.4 312 77.2
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 7.2e-142 507.7 312 76.9
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 2.1e-141 506.1 313 75.7
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.7e-141 505.0 312 76.9
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.8e-140 503.1 317 75.1
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 5.2e-140 501.5 309 75.4
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 8.9e-140 500.7 307 75.6
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 2.6e-139 499.2 311 74.6
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.6e-139 499.2 299 76.9
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 2.6e-139 499.2 305 76.1
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 9.8e-139 497.3 308 74.7
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.3e-138 496.9 305 76.4
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 2.4e-137 492.7 309 74.8
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 3.2e-137 492.3 303 76.9
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 7.0e-137 491.1 284 79.2
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.5e-136 488.8 300 75.3
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 4.5e-136 488.4 302 75.2
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 5.9e-136 488.0 310 71.9
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 5.9e-136 488.0 306 75.2
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.7e-135 486.5 299 73.2
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 2.3e-135 486.1 308 74.4
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 2.9e-135 485.7 285 77.2
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 3.9e-135 485.3 306 73.5
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 5.0e-135 485.0 306 74.2
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 5.0e-135 485.0 298 75.5
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.1e-134 483.8 310 71.0
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.1e-134 483.8 303 74.9
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.9e-134 483.0 287 78.4
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 3.3e-134 482.3 284 76.4
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 3.3e-134 482.3 284 78.2
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 7.3e-134 481.1 316 72.5
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 7.3e-134 481.1 313 73.5
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.2e-133 480.3 309 75.1
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.2e-133 480.3 308 73.1
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.2e-133 480.3 313 73.2
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.8e-133 479.2 288 76.7
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 4.7e-133 478.4 302 73.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 4.7e-133 478.4 318 71.1
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 1.4e-132 476.9 308 72.4
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.8e-132 476.5 305 72.5
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 4.0e-132 475.3 285 75.4
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 5.2e-132 474.9 302 72.8
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 6.8e-132 474.6 285 78.2
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 8.9e-132 474.2 306 72.2
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 2.0e-131 473.0 303 73.6
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.0e-131 473.0 309 72.5
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 4.4e-131 471.9 317 71.6
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 5.8e-131 471.5 303 73.3
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 1.7e-130 469.9 317 71.3
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 2.9e-130 469.2 314 69.7
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 3.7e-130 468.8 302 73.5
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.2e-128 463.8 322 68.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 3.5e-128 462.2 271 78.2
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 2.3e-127 459.5 298 72.8
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 2.3e-127 459.5 298 72.8
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 8.6e-127 457.6 329 69.3
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.1e-126 457.2 302 66.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 1.1e-124 450.7 307 67.8
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.4e-123 445.3 322 66.1
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 1.7e-122 443.4 282 72.3
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 2.2e-122 443.0 306 71.2
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 4.1e-121 438.7 265 75.1
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 2.1e-117 426.4 285 70.2
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.8e-116 423.3 247 78.5
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 4.0e-116 422.2 248 77.8
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.5e-115 420.2 306 63.7
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 2.2e-114 416.4 246 78.5
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.6e-112 410.2 253 75.1
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 7.3e-110 401.4 244 74.2
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 4.0e-108 395.6 292 62.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.0e-107 393.3 304 58.9
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 5.6e-102 375.2 304 58.2
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 9.6e-102 374.4 256 70.7
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.3e-101 374.0 298 57.4
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.8e-100 370.2 301 59.5
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.6e-96 357.1 282 57.8
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.4e-84 317.4 195 73.3
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 8.7e-71 271.6 293 47.8
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 2.0e-67 260.4 160 76.2
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.1e-62 244.6 146 78.1
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.7e-50 204.1 114 78.1
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.5e-50 202.2 109 78.9
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 4.0e-47 193.0 124 75.0
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.6e-43 180.3 103 80.6
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.0e-42 178.3 283 37.5
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.5e-41 174.5 111 73.9
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.4e-36 157.1 156 54.5
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.2e-30 138.3 126 57.9
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 4.1e-28 129.8 86 72.1
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.5e-22 111.3 137 48.2
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 4.0e-15 86.7 49 79.6
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 5.2e-15 86.3 55 67.3
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 5.4e-12 76.3 44 72.7
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 9.2e-12 75.5 39 82.1
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 7.3e-09 65.9 42 69.0


User provided reference genes

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