Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.3e-84 315.8 202 100.0
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 1.1e-73 280.4 202 86.6
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.1e-70 270.4 203 80.3
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.7e-63 246.5 202 82.2
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 7.3e-54 214.5 204 63.2
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 3.6e-53 212.2 152 77.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 6.2e-53 211.5 161 73.9
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 6.2e-53 211.5 133 81.2
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 8.1e-53 211.1 202 69.8
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 8.1e-53 211.1 202 69.8
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 8.1e-53 211.1 151 76.8
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 1.1e-52 210.7 215 63.7
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 3.1e-52 209.1 138 79.0
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 8.9e-52 207.6 212 68.9
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.5e-51 206.8 202 60.4
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 2.6e-51 206.1 163 70.6
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 4.4e-51 205.3 158 69.6
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 5.8e-51 204.9 143 75.5
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 7.6e-51 204.5 202 63.4
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 7.6e-51 204.5 163 66.9
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 9.9e-51 204.1 203 68.0
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.2e-50 203.0 164 67.1
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 2.2e-50 203.0 161 70.8
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 2.9e-50 202.6 210 64.3
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.7e-50 202.2 207 62.8
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 3.7e-50 202.2 212 65.1
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 3.7e-50 202.2 163 70.6
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 6.4e-50 201.4 164 67.1
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 8.3e-50 201.1 164 66.5
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 8.3e-50 201.1 162 69.8
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 8.3e-50 201.1 141 77.3
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.1e-49 200.7 141 73.0
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-49 200.7 132 80.3
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.4e-49 200.3 164 68.3
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.9e-49 199.9 134 78.4
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.9e-49 199.9 134 79.1
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 2.4e-49 199.5 135 76.3
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.1e-49 198.7 202 65.8
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 5.4e-49 198.4 151 74.8
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 7.1e-49 198.0 162 67.3
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 7.1e-49 198.0 163 68.1
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 9.2e-49 197.6 140 74.3
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 9.2e-49 197.6 140 75.7
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 9.2e-49 197.6 201 56.7
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 9.2e-49 197.6 135 78.5
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 1.6e-48 196.8 138 77.5
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 2.1e-48 196.4 160 68.1
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 4.6e-48 195.3 136 75.7
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 6.0e-48 194.9 164 67.1
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 7.8e-48 194.5 172 66.3
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 7.8e-48 194.5 152 68.4
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.7e-47 193.4 138 71.7
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.7e-47 193.4 163 67.5
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 2.3e-47 193.0 164 67.7
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.3e-47 193.0 205 64.4
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 5.1e-47 191.8 152 67.1
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.1e-46 190.7 153 69.9
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.3e-46 189.1 152 65.8
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 3.3e-46 189.1 152 65.8
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 5.6e-46 188.3 160 61.2
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.6e-46 188.3 156 67.3
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 5.6e-46 188.3 152 67.8
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 7.3e-46 188.0 156 68.6
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 7.3e-46 188.0 135 72.6
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.2e-45 187.2 152 65.1
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.6e-45 186.8 153 68.0
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 2.1e-45 186.4 238 57.1
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 2.1e-45 186.4 238 57.1
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 2.1e-45 186.4 238 57.1
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 2.8e-45 186.0 152 63.8
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 3.6e-45 185.7 152 63.8
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 4.7e-45 185.3 140 66.4
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.7e-45 185.3 155 66.5
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.7e-45 185.3 153 67.3
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 6.2e-45 184.9 164 65.9
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 6.2e-45 184.9 225 60.0
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 6.2e-45 184.9 141 68.1
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 6.2e-45 184.9 152 66.4
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 8.1e-45 184.5 152 63.2
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 8.1e-45 184.5 152 63.2
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 8.1e-45 184.5 133 72.9
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 8.1e-45 184.5 152 64.5
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.4e-44 183.7 130 73.1
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 2.4e-44 183.0 230 53.5
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.4e-44 183.0 152 66.4
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.7e-42 176.8 204 57.8
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.7e-42 176.8 135 68.9
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.7e-42 176.8 130 70.8
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.9e-42 175.3 137 66.4
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 4.9e-42 175.3 132 69.7
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 6.4e-42 174.9 130 71.5
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.4e-42 174.5 157 62.4
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 8.4e-42 174.5 130 71.5
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 8.4e-42 174.5 135 67.4
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 8.4e-42 174.5 134 70.1
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.1e-41 174.1 131 71.8
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.4e-41 172.9 153 65.4
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 3.2e-41 172.6 132 71.2
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 3.2e-41 172.6 139 66.2
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 7.1e-41 171.4 157 61.1
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.1e-40 169.9 126 70.6
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 2.7e-40 169.5 130 66.2
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-40 168.7 238 54.2
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.3e-39 166.4 169 56.2
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.3e-39 166.4 153 64.1
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 2.1e-37 159.8 155 61.3
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 4.8e-37 158.7 155 60.6
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 3.1e-36 156.0 130 63.1
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 9.0e-36 154.5 140 60.0
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.6e-35 151.4 138 59.4
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.3e-34 150.6 135 63.0
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.7e-34 150.2 104 75.0
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 3.8e-34 149.1 168 53.0
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 3.8e-34 149.1 168 53.0
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 3.8e-34 149.1 168 53.0
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 4.9e-34 148.7 140 60.0
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 4.9e-34 148.7 140 60.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 8.4e-34 147.9 204 48.5
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 3.5e-32 142.5 165 53.9
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-32 142.1 166 53.6
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 7.8e-32 141.4 168 52.4
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 7.8e-32 141.4 168 52.4
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.7e-31 140.2 165 53.3
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 3.0e-31 139.4 154 54.5
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.1e-30 137.5 135 58.5
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 4.3e-30 135.6 130 56.2
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.9e-28 128.3 136 54.4
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 3.4e-27 125.9 150 54.0
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.3e-26 124.0 98 67.3
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 3.8e-26 122.5 132 55.3
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 8.4e-26 121.3 167 50.3
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 8.4e-26 121.3 167 50.3
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.4e-25 120.6 151 50.3
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 1.2e-24 117.5 115 58.3
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.3e-23 114.0 134 56.0
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.4e-20 103.2 100 61.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 3.2e-17 92.8 67 74.6
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 4.2e-09 65.9 69 59.4
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 7.9e-08 61.6 58 56.9
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.3e-07 60.8 155 31.6


User provided reference genes

Program Settings