Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.6e-285 985.3 459 100.0
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 4.2e-275 950.7 481 93.1
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 7.7e-269 929.9 459 94.6
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 2.4e-262 908.3 459 90.4
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 5.4e-262 907.1 459 91.7
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.0e-261 905.2 459 92.2
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 6.6e-260 900.2 459 90.4
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 5.6e-259 897.1 459 90.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 9.5e-259 896.3 459 89.8
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.6e-258 895.6 460 90.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.0e-257 891.3 459 87.8
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.2e-256 889.4 459 88.2
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.6e-256 888.3 459 88.7
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 5.7e-256 887.1 460 89.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 7.5e-256 886.7 460 89.1
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 9.8e-256 886.3 459 89.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.9e-255 884.8 461 89.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-255 884.8 459 88.9
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 3.7e-255 884.4 459 88.9
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.9e-255 884.0 459 88.9
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 6.4e-255 883.6 475 85.9
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.8e-254 882.1 461 88.9
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.8e-254 882.1 461 88.9
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 3.2e-254 881.3 459 88.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 9.2e-254 879.8 460 88.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-253 879.0 459 88.0
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.0e-253 878.6 459 88.9
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-253 878.2 461 88.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.5e-253 877.9 460 87.4
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 7.8e-253 876.7 459 88.0
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.3e-252 875.9 459 88.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.9e-252 874.4 461 88.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.1e-251 872.8 460 86.5
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.3e-251 871.3 459 86.1
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.6e-250 869.0 459 88.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.6e-250 867.8 461 87.2
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.0e-249 866.3 460 85.9
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.2e-248 862.8 459 85.4
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.4e-248 860.9 459 86.9
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.2e-247 858.6 460 86.3
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.2e-247 858.6 460 86.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 3.5e-245 851.3 459 83.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 4.6e-245 850.9 460 84.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 4.6e-245 850.9 460 84.3
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.0e-244 849.7 459 85.0
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.3e-244 848.6 459 83.2
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 3.9e-244 847.8 459 83.4
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 3.9e-244 847.8 459 83.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.5e-243 845.9 460 83.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.5e-243 845.9 459 84.5
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.9e-243 845.5 460 83.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 6.2e-242 840.5 460 83.7
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.1e-241 838.2 460 83.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 7.5e-240 833.6 459 82.1
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 4.9e-239 830.9 461 82.4
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.1e-238 829.7 459 81.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.9e-238 828.9 459 81.7
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.9e-238 828.9 459 81.9
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.1e-238 827.8 459 81.3
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.3e-236 822.8 460 82.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.3e-236 822.8 461 82.6
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 8.6e-236 820.1 458 82.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.5e-235 819.3 459 81.0
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 4.3e-235 817.8 459 82.8
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 9.5e-235 816.6 459 83.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.6e-234 815.8 455 82.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.8e-234 815.1 459 81.5
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 8.9e-233 810.1 443 83.1
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.2e-232 809.7 462 78.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.3e-231 806.2 460 80.7
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.7e-231 805.8 486 76.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 8.4e-231 803.5 460 81.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.9e-230 802.4 460 81.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 7.1e-230 800.4 497 76.5
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 7.8e-229 797.0 459 81.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 5.1e-228 794.3 459 78.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 3.3e-227 791.6 460 79.1
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.3e-227 791.6 458 79.0
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 2.1e-221 772.3 460 78.3
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.3e-220 768.8 459 76.7
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.6e-218 761.5 464 75.4
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.5e-216 756.1 458 74.7
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 6.9e-209 730.7 498 70.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.7e-204 714.1 459 72.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 9.0e-201 703.7 458 73.8
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.3e-191 673.3 394 77.9
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.6e-189 664.8 455 66.4
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.0e-188 662.1 450 65.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.1e-188 661.4 338 90.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.2e-186 656.0 340 88.5
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.2e-186 656.0 450 64.7
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.8e-186 654.8 341 89.4
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.8e-186 654.8 341 89.4
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.1e-185 650.6 338 88.8
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.4e-184 648.7 338 89.6
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.4e-184 648.7 338 88.8
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-180 636.3 465 63.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 5.9e-176 621.3 323 88.9
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 8.5e-175 617.5 466 60.3
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 3.6e-173 612.1 338 83.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.4e-171 605.1 337 83.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-168 597.0 299 91.3
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.8e-167 592.0 337 81.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.3e-162 577.0 449 56.8
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.7e-152 542.7 300 83.3
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-151 540.4 290 86.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 4.7e-149 531.9 337 76.0
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.3e-148 529.6 300 82.3
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.6e-147 526.2 291 83.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 4.7e-141 505.4 277 82.3
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 7.3e-134 481.5 338 63.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 8.0e-133 478.0 280 78.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.3e-110 401.7 449 41.6
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.2e-97 359.8 484 37.2
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.2e-74 283.9 168 76.2
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-58 231.1 110 94.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-58 231.1 110 94.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-58 229.9 110 93.6
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.0e-51 207.6 185 57.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.5e-43 179.9 106 79.2
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.2e-13 81.3 40 90.0


User provided reference genes

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