Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 5.3e-226 787.3 389 100.0
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 3.2e-183 645.2 389 82.8
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 1.2e-142 510.4 392 66.1
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 4.4e-132 475.3 399 59.6
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 1.1e-130 470.7 391 62.4
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 4.6e-129 465.3 375 63.2
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 1.8e-125 453.4 386 58.0
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 4.0e-125 452.2 390 57.9
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 8.9e-125 451.1 390 57.7
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 1.1e-122 444.1 396 58.8
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 4.1e-122 442.2 398 56.8
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 3.5e-121 439.1 395 57.7
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 1.5e-119 433.7 386 57.3
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 1.9e-119 433.3 381 59.6
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 1.2e-116 424.1 389 56.8
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 4.0e-109 399.1 395 54.4
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 3.8e-107 392.5 375 56.0
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 7.3e-103 378.3 367 51.0
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 2.8e-102 376.3 367 50.7
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 6.9e-101 371.7 388 51.0
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 2.4e-93 346.7 415 48.2
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 1.7e-91 340.5 258 65.9
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 2.5e-90 336.7 372 47.6
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 2.1e-89 333.6 396 49.0
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 1.5e-71 274.2 359 41.8
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 1.2e-65 254.6 261 51.7
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 1.1e-61 241.5 346 36.7
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 2.4e-61 240.4 228 57.9
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 1.4e-56 224.6 284 40.8
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 3.4e-47 193.4 202 46.0
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.0e-32 145.2 437 27.9
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 2.3e-32 144.1 143 55.9
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 2.3e-32 144.1 375 29.9
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 4.0e-32 143.3 362 29.3
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 4.4e-31 139.8 356 26.7
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 8.3e-30 135.6 90 71.1
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 5.9e-28 129.4 313 28.4
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 2.5e-26 124.0 369 24.7
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.2e-25 121.7 370 24.1
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 3.9e-19 100.1 98 49.0
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 2.4e-13 80.9 107 37.4
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 3.9e-11 73.6 56 57.1
ATR0168G001 Amborella trichopoda HOM05D008798 ORTHO05D011016 1.5e-10 71.6 60 56.7
Aqoxy5G00560 Aquilegia oxysepala HOM05D000488 ORTHO05D000347 7.6e-07 59.3 177 28.8
ClCG10G011180 Citrullus lanatus HOM05D000488 ORTHO05D000347 3.7e-06 57.0 274 24.5


User provided reference genes

Program Settings