Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.2e-117 426.8 261 100.0
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 3.1e-97 359.0 266 85.7
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 5.8e-96 354.8 266 83.8
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 2.7e-85 319.3 262 80.9
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 2.2e-66 256.5 270 69.3
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 1.2e-64 250.8 264 62.5
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 2.0e-64 250.0 270 66.3
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 8.5e-63 244.6 263 58.6
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 9.7e-59 231.1 280 59.3
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 3.1e-57 226.1 261 57.9
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 9.1e-57 224.6 266 65.0
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.5e-56 222.2 261 54.8
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.8e-55 219.2 261 54.4
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.8e-55 219.2 261 54.4
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 3.8e-55 219.2 261 49.0
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 1.9e-54 216.9 281 58.7
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 3.0e-52 209.5 271 62.4
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 6.8e-52 208.4 261 58.2
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 1.5e-51 207.2 261 59.8
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 2.0e-51 206.8 261 52.9
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 5.7e-51 205.3 262 58.8
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 2.2e-50 203.4 261 59.8
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 6.3e-50 201.8 261 55.6
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 1.1e-49 201.1 275 57.5
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.8e-49 200.3 261 57.9
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.4e-49 199.9 261 57.5
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 9.1e-49 198.0 303 53.5
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 1.2e-48 197.6 261 59.8
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 2.0e-48 196.8 307 48.9
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 2.7e-48 196.4 265 58.9
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.7e-48 196.4 261 58.2
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 4.5e-48 195.7 261 58.6
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 5.9e-48 195.3 261 58.2
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 5.9e-48 195.3 261 58.2
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 3.8e-47 192.6 261 58.2
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.5e-46 189.9 261 57.5
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 4.2e-46 189.1 262 56.5
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 9.4e-46 188.0 269 48.7
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 2.3e-44 183.3 261 54.0
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 6.8e-44 181.8 263 56.3
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 2.6e-43 179.9 268 55.6
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 5.7e-43 178.7 261 54.0
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 1.7e-42 177.2 261 58.2
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 2.2e-42 176.8 261 46.0
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 2.2e-42 176.8 254 55.1
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 2.8e-42 176.4 279 54.1
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 4.9e-42 175.6 263 54.8
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 1.6e-40 170.6 313 50.8
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.5e-40 169.5 250 54.4
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 7.7e-40 168.3 263 54.4
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 3.8e-39 166.0 252 46.0
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 2.5e-38 163.3 261 43.7
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 2.5e-38 163.3 260 53.1
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.3e-38 162.5 253 53.4
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 4.3e-38 162.5 253 53.4
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 3.6e-37 159.5 260 50.0
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 2.3e-36 156.8 265 52.1
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 4.0e-36 156.0 260 53.1
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 4.4e-35 152.5 265 50.6
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 4.4e-35 152.5 230 55.2
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 9.8e-35 151.4 252 40.9
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.7e-34 150.6 252 40.1
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 2.2e-34 150.2 256 50.8
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 8.3e-34 148.3 264 50.4
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 9.2e-33 144.8 260 48.5
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 5.9e-32 142.1 246 48.8
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 3.3e-30 136.3 258 46.5
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 9.5e-30 134.8 265 49.1
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 9.5e-30 134.8 259 47.1
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 1.2e-27 127.9 260 39.6
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 4.4e-27 125.9 253 43.9
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.3e-26 124.4 252 46.0
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 2.0e-24 117.1 192 43.2
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 3.9e-23 112.8 260 44.6
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 3.6e-21 106.3 269 39.4
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 4.7e-21 105.9 292 32.5
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 8.1e-21 105.1 259 33.2
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 3.1e-20 103.2 253 40.7
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 3.1e-20 103.2 253 40.7
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 4.0e-20 102.8 253 39.9
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 4.0e-20 102.8 253 39.9
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 4.0e-20 102.8 259 40.2
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 8.9e-20 101.7 269 42.0
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 1.5e-19 100.9 257 41.2
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 2.6e-19 100.1 271 33.6
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 7.5e-19 98.6 262 33.6
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 4.9e-18 95.9 233 40.8
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.4e-17 94.4 162 42.6
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 9.2e-17 91.7 117 53.0
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 4.6e-16 89.4 253 39.5
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 4.6e-16 89.4 264 37.5
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 1.9e-14 84.0 218 33.9
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 5.6e-14 82.4 206 35.0
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 5.6e-14 82.4 260 41.2
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 2.1e-13 80.5 260 41.2
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 2.4e-09 67.0 254 28.7
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 7.1e-09 65.5 77 48.1
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 7.8e-08 62.0 83 72.3
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 1.3e-07 61.2 231 32.9
ClCG01G022030 Citrullus lanatus HOM05D002166 ORTHO05D002634 3.9e-07 59.7 239 29.3
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 5.1e-07 59.3 259 25.1
Psat1g181320 Pisum sativum HOM05D002166 ORTHO05D002634 6.6e-07 58.9 278 28.8
Sed0003496 Sechium edule HOM05D002166 ORTHO05D002634 2.5e-06 57.0 219 29.2


User provided reference genes

Program Settings