Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G145800 Populus trichocarpa HOM05D000082 ORTHO05D050571 4.7e-137 491.1 237 100.0
Sabra01G0061600 Salix brachista HOM05D000082 ORTHO05D050571 1.1e-48 197.6 237 44.3
HPP92_022755 Vanilla planifolia HOM05D018615 ORTHO05D003830 1.7e-09 67.4 101 34.7
PGSC0003DMG400002830 Solanum tuberosum HOM05D000082 ORTHO05D000038 2.9e-09 66.6 103 35.0
Solyc04g005760.1 Solanum lycopersicum HOM05D000082 ORTHO05D000038 1.1e-08 64.7 158 27.2
Lalb_Chr11g0067361 Lupinus albus HOM05D000082 ORTHO05D000038 1.4e-08 64.3 84 36.9
Migut.D01459 Erythranthe guttata HOM05D000082 ORTHO05D000038 1.9e-08 63.9 89 37.1
Migut.D01576 Erythranthe guttata HOM05D000082 ORTHO05D000038 1.9e-08 63.9 67 43.3
Gohir.A08G000121 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.9e-08 63.9 66 36.4
Gorai.004G002900 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.9e-08 63.9 66 36.4
Solyc04g005740.1 Solanum lycopersicum HOM05D000082 ORTHO05D000038 1.9e-08 63.9 103 35.0
HPP92_022451 Vanilla planifolia HOM05D018615 ORTHO05D003830 1.9e-08 63.9 48 50.0
HPP92_022453 Vanilla planifolia HOM05D018615 ORTHO05D003830 1.9e-08 63.9 48 50.0
HPP92_022456 Vanilla planifolia HOM05D018615 ORTHO05D003830 1.9e-08 63.9 48 50.0
Sopen04g001790 Solanum pennellii HOM05D000082 ORTHO05D000038 3.2e-08 63.2 103 33.0
Thecc.01G156200 Theobroma cacao HOM05D000082 ORTHO05D000038 3.2e-08 63.2 61 42.6
Migut.D01455 Erythranthe guttata HOM05D000082 ORTHO05D000038 4.2e-08 62.8 68 45.6
Gohir.A07G199450 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.2e-08 62.8 66 37.9
Gohir.D07G205866 Gossypium hirsutum HOM05D000082 ORTHO05D000038 4.2e-08 62.8 66 37.9
Gorai.001G232000 Gossypium raimondii HOM05D000082 ORTHO05D000038 4.2e-08 62.8 66 37.9
PGSC0003DMG400002832 Solanum tuberosum HOM05D000082 ORTHO05D000038 4.2e-08 62.8 150 24.7
PGSC0003DMG400014839 Solanum tuberosum HOM05D000082 ORTHO05D000038 5.4e-08 62.4 144 27.1
Cfa018089 Carpinus fangiana HOM05D041354 ORTHO05D000038 7.1e-08 62.0 73 39.7
Gohir.D08G009750 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.1e-08 62.0 66 36.4
Migut.D01458 Erythranthe guttata HOM05D000082 ORTHO05D000038 9.3e-08 61.6 68 44.1
Migut.D01461 Erythranthe guttata HOM05D000082 ORTHO05D000038 9.3e-08 61.6 68 44.1
Gorai.001G232200 Gossypium raimondii HOM05D000082 ORTHO05D000038 9.3e-08 61.6 66 36.4
Sopen04g001810 Solanum pennellii HOM05D000082 ORTHO05D000038 9.3e-08 61.6 110 32.7
BcaC02g07429 Brassica carinata HOM05D000082 ORTHO05D001639 1.2e-07 61.2 51 47.1
BcaC02g07430 Brassica carinata HOM05D000082 ORTHO05D001639 1.2e-07 61.2 51 47.1
C04p67520 Brassica napus HOM05D000082 ORTHO05D001639 1.2e-07 61.2 51 47.1
Migut.D01454 Erythranthe guttata HOM05D000082 ORTHO05D000038 1.2e-07 61.2 63 44.4
Migut.D01457 Erythranthe guttata HOM05D000082 ORTHO05D000038 1.2e-07 61.2 63 44.4
Gohir.A08G001150 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.2e-07 61.2 66 34.8
Gorai.004G005700 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.6e-07 60.8 56 41.1
Lalb_Chr16g0381781 Lupinus albus HOM05D000082 ORTHO05D000038 1.6e-07 60.8 83 36.1
vmacro17512 Vaccinium macrocarpon HOM05D000082 ORTHO05D000038 1.6e-07 60.8 49 49.0
Manes.17G117600 Manihot esculenta HOM05D000082 ORTHO05D000038 2.1e-07 60.5 63 41.3
QL10p015716 Quercus lobata HOM05D000082 ORTHO05D000038 2.1e-07 60.5 49 46.9
Lj2C677T9 Lonicera japonica HOM05D000082 ORTHO05D000038 2.7e-07 60.1 49 46.9
Solyc10g052480.1 Solanum lycopersicum HOM05D000082 ORTHO05D000038 2.7e-07 60.1 50 44.0
ClCG04G000540 Citrullus lanatus HOM05D000082 ORTHO05D000038 3.5e-07 59.7 54 46.3
Gohir.D08G047525 Gossypium hirsutum HOM05D000082 ORTHO05D000038 3.5e-07 59.7 86 36.0
Potri.001G185200 Populus trichocarpa HOM05D000082 ORTHO05D000038 3.5e-07 59.7 57 42.1
Migut.H02329 Erythranthe guttata HOM05D000082 ORTHO05D000038 4.6e-07 59.3 49 49.0
Migut.H02331 Erythranthe guttata HOM05D000082 ORTHO05D000038 4.6e-07 59.3 94 39.4
QL10p015738 Quercus lobata HOM05D000082 ORTHO05D000038 4.6e-07 59.3 173 25.4
Sabra07G0087500 Salix brachista HOM05D000082 ORTHO05D000038 4.6e-07 59.3 51 39.2
Thhalv10016765m.g Eutrema salsugineum HOM05D000082 ORTHO05D001639 6.0e-07 58.9 49 44.9
Gohir.D08G047575 Gossypium hirsutum HOM05D000082 ORTHO05D000038 6.0e-07 58.9 58 39.7
Rhsim08G0158100 Rhododendron simsii HOM05D000082 ORTHO05D000001 6.0e-07 58.9 49 46.9
Atru.chr13.1866 Acer truncatum HOM05D000082 ORTHO05D000038 7.9e-07 58.5 77 36.4
Duzib114G0003 Durio zibethinus HOM05D000082 ORTHO05D000038 7.9e-07 58.5 72 45.8
Gohir.A13G071833 Gossypium hirsutum HOM05D000082 ORTHO05D000038 7.9e-07 58.5 58 37.9
Phvul.007G098000 Phaseolus vulgaris HOM05D000459 ORTHO05D000038 7.9e-07 58.5 58 43.1
Phvul.007G098100 Phaseolus vulgaris HOM05D000459 ORTHO05D000038 7.9e-07 58.5 58 43.1
RcHm_v2.0_Chr6g0295911 Rosa chinensis HOM05D000082 ORTHO05D000038 7.9e-07 58.5 64 40.6
Atru.chr3.1363 Acer truncatum HOM05D000082 ORTHO05D000038 1.0e-06 58.2 56 46.4
Gohir.D07G205833 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.0e-06 58.2 66 34.8
Gohir.D13G074500 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.0e-06 58.2 58 37.9
Gorai.004G046800 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.0e-06 58.2 58 39.7
Gorai.004G047000 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.0e-06 58.2 58 39.7
Gorai.013G085100 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.0e-06 58.2 58 37.9
Phvul.007G097600 Phaseolus vulgaris HOM05D000459 ORTHO05D000038 1.0e-06 58.2 61 41.0
Phvul.011G178250 Phaseolus vulgaris HOM05D000459 ORTHO05D000038 1.0e-06 58.2 60 43.3
Potri.007G107000 Populus trichocarpa HOM05D000082 ORTHO05D000038 1.0e-06 58.2 49 40.8
Ca_14328_v3 Cicer arietinum L. HOM05D000082 ORTHO05D000038 1.3e-06 57.8 43 53.5
Duzib147G1344 Durio zibethinus HOM05D000082 ORTHO05D000038 1.3e-06 57.8 77 37.7
Gohir.A08G037100 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.3e-06 57.8 58 39.7
Gohir.D13G074651 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.3e-06 57.8 60 36.7
Potri.005G062400 Populus trichocarpa HOM05D000082 ORTHO05D000038 1.3e-06 57.8 49 42.9
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 1.7e-06 57.4 64 40.6
Gohir.D05G366033 Gossypium hirsutum HOM05D000082 ORTHO05D000038 1.7e-06 57.4 58 39.7
Gorai.009G425900 Gossypium raimondii HOM05D000082 ORTHO05D000038 1.7e-06 57.4 58 39.7
Aa31LG3G11100 Aethionema arabicum HOM05D014881 ORTHO05D014332 2.3e-06 57.0 42 50.0
Gohir.A08G037000 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.3e-06 57.0 58 39.7
Gohir.A08G037200 Gossypium hirsutum HOM05D000082 ORTHO05D000038 2.3e-06 57.0 58 39.7
Phvul.007G097700 Phaseolus vulgaris HOM05D000459 ORTHO05D000038 2.3e-06 57.0 56 42.9
Potri.007G118000 Populus trichocarpa HOM05D000082 ORTHO05D000038 2.3e-06 57.0 49 38.8
PGSC0003DMG400002846 Solanum tuberosum HOM05D000082 ORTHO05D000038 2.3e-06 57.0 50 42.0
EL10Ac6g14936 Beta vulgaris HOM05D000082 ORTHO05D000038 3.0e-06 56.6 47 42.6
Cpa.g.sc26.92 Carica papaya HOM05D000082 ORTHO05D018908 3.0e-06 56.6 41 48.8
Migut.L00894 Erythranthe guttata HOM05D000082 ORTHO05D000038 3.0e-06 56.6 71 39.4
Eucgr.B00460 Eucalyptus grandis HOM05D000082 ORTHO05D000038 3.0e-06 56.6 137 29.9
FvH4_2g27040 Fragaria vesca HOM05D000082 ORTHO05D000038 3.0e-06 56.6 64 39.1
FAN17G1531 Fragaria x ananassa HOM05D000454 ORTHO05D007581 3.0e-06 56.6 55 41.8
Gorai.013G085300 Gossypium raimondii HOM05D000082 ORTHO05D000038 3.0e-06 56.6 60 36.7
Oeu003258.1 Olea europaea HOM05D000082 ORTHO05D000038 3.0e-06 56.6 173 24.9
Solyc09g059130.1 Solanum lycopersicum HOM05D000082 ORTHO05D000038 3.0e-06 56.6 103 29.1
Ciclev10020902m.g Citrus clementina HOM05D000082 ORTHO05D000038 3.9e-06 56.2 49 42.9
MBI18_g38426_MAGBIO Magnolia biondii HOM05D018439 ORTHO05D000038 3.9e-06 56.2 48 41.7
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 5.1e-06 55.8 63 41.3
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 5.1e-06 55.8 67 37.3
Migut.D01577 Erythranthe guttata HOM05D000082 ORTHO05D000038 5.1e-06 55.8 67 41.8
Gohir.D08G011866 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.1e-06 55.8 66 33.3
Medtr3g025510 Medicago truncatula HOM05D000082 ORTHO05D000038 5.1e-06 55.8 56 41.1
Pp3c26_4440 Physcomitrium patens HOM05D001689 ORTHO05D001643 5.1e-06 55.8 43 51.2
AL1G31270 Arabidopsis lyrata HOM05D007117 ORTHO05D000038 6.6e-06 55.5 52 40.4
ClCG09G003690 Citrullus lanatus HOM05D000082 ORTHO05D000038 6.6e-06 55.5 58 41.4
Haze_00433 Corylus avellana HOM05D000082 ORTHO05D000038 6.6e-06 55.5 65 38.5
Migut.H02397 Erythranthe guttata HOM05D000082 ORTHO05D000038 6.6e-06 55.5 109 31.2
Migut.H02398 Erythranthe guttata HOM05D000082 ORTHO05D000038 6.6e-06 55.5 53 45.3
Gohir.A13G072233 Gossypium hirsutum HOM05D000082 ORTHO05D000038 6.6e-06 55.5 58 34.5
MD02G1241100 Malus domestica HOM05D000082 ORTHO05D000038 6.6e-06 55.5 57 40.4
Nn2g15190 Nelumbo nucifera HOM05D000082 ORTHO05D000038 6.6e-06 55.5 54 40.7
Phvul.011G178300 Phaseolus vulgaris HOM05D000082 ORTHO05D000038 6.6e-06 55.5 60 41.7
RcHm_v2.0_Chr7g0236701 Rosa chinensis HOM05D000082 ORTHO05D019172 6.6e-06 55.5 55 40.0
Migut.E01466 Erythranthe guttata HOM05D000082 ORTHO05D007743 8.7e-06 55.1 41 46.3
Medtr2g061790 Medicago truncatula HOM05D000082 ORTHO05D000038 8.7e-06 55.1 51 41.2
PSO782G5121 Papaver somniferum HOM05D000082 ORTHO05D000038 8.7e-06 55.1 68 35.3
Pp3c11_13800 Physcomitrium patens HOM05D060583 ORTHO05D007743 8.7e-06 55.1 42 45.2


User provided reference genes

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