Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 2.6e-53 211.8 109 100.0
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 3.3e-45 184.9 109 86.2
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.1e-43 179.9 110 84.5
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 3.5e-34 148.3 112 71.4
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 2.5e-24 115.5 109 62.4
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 6.8e-22 107.5 113 55.8
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 3.7e-20 101.7 106 53.8
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 4.9e-20 101.3 109 54.1
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 1.4e-19 99.8 110 51.8
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.1e-19 98.6 105 59.0
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 9.2e-19 97.1 104 55.8
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 1.6e-18 96.3 101 56.4
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 2.0e-18 95.9 105 54.3
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.5e-18 94.7 99 54.5
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 1.0e-17 93.6 118 50.8
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.7e-17 92.8 105 54.3
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 6.6e-17 90.9 107 51.4
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.5e-16 89.7 105 52.4
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.5e-16 89.7 106 50.0
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 1.9e-16 89.4 99 52.5
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.9e-16 89.4 105 54.3
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.3e-16 88.6 100 52.0
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 7.3e-16 87.4 109 49.5
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 7.3e-16 87.4 108 50.0
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 1.6e-15 86.3 103 53.4
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 2.8e-15 85.5 83 59.0
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 4.7e-15 84.7 106 46.2
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 4.7e-15 84.7 104 49.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 8.0e-15 84.0 113 48.7
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 1.8e-14 82.8 101 49.5
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.8e-14 82.8 115 47.0
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 3.0e-14 82.0 102 49.0
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 3.0e-14 82.0 100 45.0
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 4.0e-14 81.6 111 46.8
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 5.2e-14 81.3 105 52.4
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 5.2e-14 81.3 107 46.7
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 5.2e-14 81.3 100 48.0
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 5.2e-14 81.3 107 47.7
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 6.8e-14 80.9 107 48.6
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 6.8e-14 80.9 111 46.8
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 6.8e-14 80.9 102 49.0
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 8.9e-14 80.5 103 46.6
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 8.9e-14 80.5 103 46.6
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 8.9e-14 80.5 107 49.5
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 8.9e-14 80.5 113 49.6
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 1.5e-13 79.7 111 42.3
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 1.5e-13 79.7 115 48.7
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 2.0e-13 79.3 109 46.8
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 2.6e-13 79.0 110 49.1
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 2.6e-13 79.0 109 45.0
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 2.6e-13 79.0 100 46.0
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 4.4e-13 78.2 100 49.0
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 4.4e-13 78.2 105 48.6
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 4.4e-13 78.2 100 45.0
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 7.5e-13 77.4 96 46.9
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 7.5e-13 77.4 114 45.6
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 1.3e-12 76.6 111 45.0
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 1.7e-12 76.3 103 49.5
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 2.2e-12 75.9 102 43.1
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 2.9e-12 75.5 104 42.3
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 2.9e-12 75.5 104 42.3
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 3.7e-12 75.1 78 53.8
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 3.7e-12 75.1 105 44.8
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 6.4e-12 74.3 100 46.0
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 6.4e-12 74.3 111 42.3
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 8.3e-12 73.9 106 42.5
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 1.9e-11 72.8 122 39.3
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 2.4e-11 72.4 83 53.0
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 2.4e-11 72.4 109 44.0
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 2.4e-11 72.4 113 46.0
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 4.1e-11 71.6 100 45.0
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 5.4e-11 71.2 66 51.5
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 7.0e-11 70.9 64 56.2
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 9.2e-11 70.5 113 43.4
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 2.7e-10 68.9 67 53.7
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.7e-10 68.9 101 47.5
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 3.5e-10 68.6 101 49.5
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 3.5e-10 68.6 101 49.5
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 1.0e-09 67.0 55 60.0
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 1.7e-09 66.2 101 48.5
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 3.0e-09 65.5 99 43.4
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 3.9e-09 65.1 116 39.7
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 5.0e-09 64.7 76 51.3
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 5.0e-09 64.7 136 41.2
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 6.6e-09 64.3 109 45.0
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 6.6e-09 64.3 112 40.2
HPP92_008631 Vanilla planifolia HOM05D026338 ORTHO05D007875 1.9e-08 62.8 106 40.6
Gohir.D03G083700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 9.5e-08 60.5 108 44.4
Gohir.A02G100100 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.1e-07 59.3 107 44.9
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 2.8e-07 58.9 104 35.6
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 4.7e-07 58.2 119 36.1
SalBow8G4830 Salvia bowleyana HOM05D007590 ORTHO05D007875 8.0e-07 57.4 61 50.8
Zm00001eb204270 Zea mays HOM05D021977 ORTHO05D007875 8.0e-07 57.4 58 58.6
Zm00001eb277920 Zea mays HOM05D021977 ORTHO05D007875 1.1e-06 57.0 110 36.4
Gorai.003G079000 Gossypium raimondii HOM05D007590 ORTHO05D007875 1.4e-06 56.6 101 43.6
THA.LOC104815061 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 1.4e-06 56.6 114 37.7
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 1.8e-06 56.2 115 35.7
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 2.3e-06 55.8 115 34.8
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 3.1e-06 55.5 115 33.9
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 3.1e-06 55.5 115 33.9
Gohir.A02G100200 Gossypium hirsutum HOM05D007590 ORTHO05D007875 3.1e-06 55.5 100 39.0
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 4.0e-06 55.1 115 34.8
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 8.9e-06 53.9 130 29.2
Zm00001eb383160 Zea mays HOM05D021977 ORTHO05D007875 8.9e-06 53.9 126 34.9


User provided reference genes

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