Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 0.0e+00 1375.5 705 100.0
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 0.0e+00 1090.1 706 82.7
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.1e-285 986.5 703 76.5
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 8.2e-262 907.1 724 70.2
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 4.6e-172 609.0 672 53.7
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 2.4e-160 570.1 644 51.9
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 4.1e-160 569.3 530 60.0
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 1.4e-157 560.8 652 51.1
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 3.2e-157 559.7 641 52.3
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 3.3e-154 549.7 707 49.1
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 4.4e-146 522.7 673 48.6
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 7.5e-146 521.9 644 49.5
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 5.9e-143 512.3 640 49.2
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 9.4e-141 505.0 709 47.0
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 1.8e-136 490.7 606 48.8
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 1.3e-134 484.6 720 44.9
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 6.5e-134 482.3 707 44.6
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.6e-132 477.6 590 49.5
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 3.6e-132 476.5 590 49.2
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 4.7e-132 476.1 563 50.3
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 3.0e-131 473.4 590 48.8
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.0e-130 470.7 641 45.9
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.4e-128 464.5 664 44.9
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 5.0e-126 456.1 627 45.5
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 6.6e-126 455.7 666 44.4
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.2e-122 444.9 636 42.8
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 2.0e-122 444.1 645 44.8
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.4e-121 439.1 643 44.6
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-120 438.0 601 46.3
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.0e-118 429.5 665 43.9
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 5.0e-118 429.5 629 44.7
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 6.6e-118 429.1 608 45.1
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.9e-117 427.6 589 46.2
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 2.5e-117 427.2 666 41.9
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 9.5e-117 425.2 592 45.8
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-115 421.8 624 44.7
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 8.9e-115 418.7 644 42.7
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.5e-114 415.6 624 44.2
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.9e-113 413.7 628 43.2
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 3.7e-113 413.3 586 45.1
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.9e-113 412.9 624 44.4
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.1e-112 411.8 552 46.6
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.9e-112 411.0 631 42.9
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.9e-109 401.0 655 41.2
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.2e-108 398.3 680 40.7
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 4.7e-108 396.4 642 42.7
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.1e-107 395.2 658 39.7
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.4e-107 394.8 672 40.3
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.3e-105 388.3 593 42.0
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 2.1e-103 380.9 685 38.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 1.3e-102 378.3 582 42.8
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.3e-102 378.3 598 44.5
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.1e-101 375.2 669 40.4
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 9.5e-101 372.1 611 41.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.6e-100 371.3 585 40.9
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 6.2e-100 369.4 670 39.0
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.2e-98 365.2 573 42.1
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 2.0e-98 364.4 586 42.2
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 3.8e-97 360.1 726 37.6
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.1e-96 358.6 700 38.7
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.7e-94 351.3 610 39.0
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 1.9e-93 347.8 652 37.3
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 2.5e-93 347.4 725 37.8
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 3.1e-91 340.5 649 38.5
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 6.9e-91 339.3 517 42.0
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.4e-88 331.6 680 37.5
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 4.2e-88 330.1 644 38.8
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 9.3e-88 328.9 684 37.4
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 3.0e-86 323.9 546 39.6
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.9e-86 323.6 754 35.0
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.1e-86 323.2 441 47.6
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.5e-85 321.6 571 39.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.9e-85 321.2 440 46.4
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.9e-83 312.8 434 44.9
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 2.2e-81 307.8 592 38.0
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.2e-81 307.8 749 34.6
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 4.9e-81 306.6 530 37.7
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.4e-80 305.1 699 36.3
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.5e-77 295.0 578 37.0
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 2.8e-76 290.8 590 35.4
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 5.8e-74 283.1 631 34.5
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 3.1e-67 260.8 629 33.9
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.0e-66 258.1 666 34.5
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.0e-66 258.1 577 35.7
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.5e-66 256.9 569 37.1
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 5.8e-66 256.5 609 34.8
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 3.8e-65 253.8 592 36.0
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 5.5e-64 250.0 655 32.8
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 2.7e-63 247.7 610 33.1
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 1.8e-62 245.0 619 35.2
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 5.1e-62 243.4 542 34.7
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 4.3e-61 240.4 646 31.9
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 5.7e-61 240.0 525 34.7
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 9.7e-61 239.2 587 33.6
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 2.4e-59 234.6 550 34.0
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.6e-58 231.1 679 32.5
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 3.4e-58 230.7 606 34.8
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 4.5e-58 230.3 645 33.5
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.0e-57 229.2 624 33.7
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 2.5e-56 224.6 569 33.6
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 2.5e-56 224.6 569 33.4
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 4.2e-56 223.8 579 34.0
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 9.4e-56 222.6 569 33.4
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 6.1e-55 219.9 449 36.7
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.9e-53 214.9 639 31.8
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.7e-52 211.8 573 33.2
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 2.3e-46 191.4 609 31.4
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.0e-45 188.3 609 31.5
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 9.7e-45 186.0 574 31.0
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 4.1e-43 180.6 484 32.6
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 5.3e-43 180.3 535 31.4
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 2.0e-42 178.3 591 30.3
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.0e-38 164.5 235 39.6
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 2.7e-31 141.4 527 28.5
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.7e-26 124.8 307 30.3
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 2.9e-25 121.3 171 40.4
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 3.8e-25 120.9 429 28.7
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 3.2e-24 117.9 271 35.4
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.2e-12 78.6 73 53.4
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 4.3e-08 64.3 112 39.3
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.6e-07 61.2 227 27.8
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 8.0e-07 60.1 130 31.5
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 2.3e-06 58.5 331 26.3


User provided reference genes

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