Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 9.5e-72 273.5 145 100.0
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 2.7e-34 149.1 144 60.4
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.5e-32 143.3 144 59.0
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.3e-25 120.2 87 73.6
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.3e-25 120.2 87 73.6
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 5.1e-25 118.2 87 72.4
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 5.1e-25 118.2 87 72.4
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 6.7e-25 117.9 103 65.0
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.9e-24 116.3 153 47.1
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 8.2e-23 110.9 109 58.7
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.4e-22 109.4 109 57.8
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.1e-22 109.0 141 48.2
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 4.0e-22 108.6 156 46.2
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 1.2e-21 107.1 159 44.0
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 4.5e-21 105.1 146 47.3
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.0e-20 104.0 111 56.8
Sabra11G0012500 Salix brachista HOM05D005411 ORTHO05D006463 2.9e-20 102.4 78 70.5
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 4.9e-20 101.7 81 67.9
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 8.4e-20 100.9 144 45.1
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 8.4e-20 100.9 154 44.8
Sabra05G0164800 Salix brachista HOM05D005411 ORTHO05D006463 1.4e-19 100.1 78 69.2
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 9.3e-19 97.4 102 52.9
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 1.2e-18 97.1 155 42.6
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 2.1e-18 96.3 122 50.0
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 2.1e-18 96.3 128 46.1
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.7e-18 95.9 158 39.9
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 7.9e-18 94.4 99 56.6
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 7.9e-18 94.4 143 46.9
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 1.3e-17 93.6 108 54.6
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 1.3e-17 93.6 143 44.8
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.8e-17 93.2 136 47.8
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.8e-17 93.2 133 44.4
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.0e-17 92.4 183 37.2
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 5.1e-17 91.7 130 44.6
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 1.1e-16 90.5 195 35.4
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 1.1e-16 90.5 107 51.4
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.5e-16 90.1 74 62.2
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 1.5e-16 90.1 138 42.0
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.6e-15 86.7 74 59.5
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 1.6e-15 86.7 107 51.4
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 2.2e-15 86.3 80 56.2
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 2.8e-15 85.9 114 46.5
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 4.8e-15 85.1 119 45.4
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 4.8e-15 85.1 143 44.1
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 4.8e-15 85.1 119 43.7
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 6.3e-15 84.7 66 69.7
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 6.3e-15 84.7 127 43.3
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 6.3e-15 84.7 72 61.1
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 6.3e-15 84.7 72 61.1
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 6.3e-15 84.7 72 61.1
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 8.2e-15 84.3 149 43.6
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 1.1e-14 84.0 115 47.8
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 1.4e-14 83.6 59 71.2
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.4e-14 83.6 155 40.0
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.4e-14 83.6 145 40.7
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 1.8e-14 83.2 72 66.7
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 2.4e-14 82.8 90 50.0
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 2.4e-14 82.8 90 50.0
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 2.4e-14 82.8 111 49.5
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 2.4e-14 82.8 98 49.0
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 2.4e-14 82.8 145 42.1
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 2.4e-14 82.8 114 45.6
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 3.1e-14 82.4 60 71.7
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 3.1e-14 82.4 72 58.3
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 3.1e-14 82.4 141 41.1
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 4.1e-14 82.0 126 42.9
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 4.1e-14 82.0 82 51.2
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 4.1e-14 82.0 70 61.4
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 5.3e-14 81.6 97 54.6
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 9.0e-14 80.9 151 39.7
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 9.0e-14 80.9 135 43.7
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.5e-13 80.1 93 46.2
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.5e-13 80.1 133 42.1
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 2.0e-13 79.7 55 78.2
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 2.0e-13 79.7 137 40.1
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 3.4e-13 79.0 110 44.5
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 4.5e-13 78.6 101 45.5
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 5.9e-13 78.2 91 50.5
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 5.9e-13 78.2 102 47.1
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 7.7e-13 77.8 65 63.1
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.7e-13 77.8 101 44.6
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.7e-13 77.8 101 44.6
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 1.0e-12 77.4 102 44.1
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 1.3e-12 77.0 110 46.4
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.3e-12 77.0 102 47.1
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 1.7e-12 76.6 102 45.1
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 2.2e-12 76.3 99 45.5
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 2.2e-12 76.3 155 37.4
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 2.9e-12 75.9 79 54.4
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.9e-12 75.9 139 40.3
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 2.9e-12 75.9 108 42.6
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 2.9e-12 75.9 108 46.3
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 8.5e-12 74.3 76 52.6
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.4e-11 73.6 114 42.1
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 1.4e-11 73.6 114 42.1
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 1.9e-11 73.2 104 43.3
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 2.5e-11 72.8 109 46.8
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 3.2e-11 72.4 122 40.2
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 4.2e-11 72.0 85 54.1
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 5.5e-11 71.6 129 40.3
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 5.5e-11 71.6 129 40.3
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 7.2e-11 71.2 65 58.5
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 7.2e-11 71.2 100 47.0
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 7.2e-11 71.2 100 47.0
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 7.2e-11 71.2 100 47.0
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 1.6e-10 70.1 114 41.2
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 1.6e-10 70.1 56 64.3
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 2.1e-10 69.7 77 51.9
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 2.1e-10 69.7 144 37.5
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 2.1e-10 69.7 69 58.0
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 2.1e-10 69.7 144 37.5
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 2.1e-10 69.7 114 39.5
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 1.0e-09 67.4 131 37.4
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 1.0e-09 67.4 99 40.4
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 2.3e-09 66.2 144 37.5
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 2.3e-09 66.2 144 37.5
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 3.9e-09 65.5 101 40.6
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 4.3e-08 62.0 83 44.6
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 5.7e-08 61.6 84 50.0
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 9.7e-08 60.8 111 39.6
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 1.3e-07 60.5 90 40.0
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 1.7e-07 60.1 48 62.5
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 6.3e-07 58.2 90 46.7
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 3.1e-06 55.8 77 51.9


User provided reference genes

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