Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.3e-99 366.3 181 100.0
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.1e-93 346.7 181 94.5
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 5.7e-82 307.8 181 85.1
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 1.8e-75 286.2 181 80.1
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 1.8e-67 259.6 181 71.8
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 4.2e-61 238.4 179 64.8
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 2.5e-53 212.6 182 59.3
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.6e-52 209.9 181 58.0
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 2.1e-52 209.5 181 56.4
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 3.6e-52 208.8 181 56.9
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 5.2e-51 204.9 180 55.0
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 6.8e-51 204.5 180 58.3
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.5e-50 203.4 181 57.5
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 2.6e-50 202.6 179 54.2
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 4.4e-50 201.8 182 57.1
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 4.4e-50 201.8 182 56.6
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 9.8e-50 200.7 182 54.4
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.3e-49 200.3 179 58.7
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.3e-49 200.3 181 55.8
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 1.7e-49 199.9 177 55.4
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 1.7e-49 199.9 181 53.0
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 2.2e-49 199.5 182 57.1
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.3e-49 198.0 181 52.5
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.1e-48 197.2 179 55.3
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 1.1e-48 197.2 181 55.2
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 2.4e-48 196.1 182 54.4
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.1e-48 195.7 181 54.7
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 4.1e-48 195.3 181 53.6
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 5.4e-48 194.9 182 56.0
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 9.1e-48 194.1 178 55.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.6e-47 193.4 181 54.7
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 2.0e-47 193.0 182 53.3
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.7e-47 192.6 181 51.4
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 3.5e-47 192.2 174 54.6
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 3.5e-47 192.2 178 54.5
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 7.7e-47 191.0 181 54.7
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 7.7e-47 191.0 179 55.3
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.7e-46 189.9 181 50.3
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.8e-46 188.7 179 52.5
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.0e-46 188.3 182 51.6
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.0e-46 188.3 182 51.6
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 6.6e-46 188.0 182 52.2
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.6e-46 188.0 182 52.2
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.6e-46 188.0 182 52.2
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 8.6e-46 187.6 172 55.2
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 2.5e-45 186.0 179 52.5
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 2.5e-45 186.0 168 56.0
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 4.2e-45 185.3 180 52.2
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 5.5e-45 184.9 182 52.7
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 9.5e-45 184.1 178 51.7
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 1.6e-44 183.3 182 51.1
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.1e-44 183.0 182 50.0
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 2.1e-44 183.0 182 52.2
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 2.8e-44 182.6 182 53.3
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 3.6e-44 182.2 172 51.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 3.6e-44 182.2 182 52.2
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.7e-44 181.8 182 50.0
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 4.7e-44 181.8 182 50.0
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 1.0e-43 180.6 175 53.7
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 1.8e-43 179.9 176 53.4
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 8.9e-43 177.6 174 52.3
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.5e-42 176.8 181 52.5
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 6.3e-41 171.4 175 52.0
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 1.8e-40 169.9 172 51.7
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 3.1e-40 169.1 176 49.4
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.2e-39 167.2 183 49.7
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 2.0e-39 166.4 183 49.7
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 7.8e-39 164.5 180 50.0
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 7.8e-39 164.5 180 46.7
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.0e-38 164.1 170 47.1
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.7e-38 163.3 168 48.8
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 2.9e-38 162.5 171 46.8
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 3.9e-38 162.2 172 48.3
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 6.6e-38 161.4 173 48.0
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 6.6e-38 161.4 172 47.1
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.9e-37 159.8 181 49.2
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 4.3e-37 158.7 165 47.3
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 5.6e-37 158.3 181 46.4
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 7.3e-37 157.9 117 62.4
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 9.5e-37 157.5 179 49.2
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 9.5e-37 157.5 176 50.0
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 1.6e-36 156.8 170 47.1
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 3.6e-36 155.6 181 47.5
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 4.7e-36 155.2 179 48.0
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 4.7e-36 155.2 180 50.0
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 6.1e-36 154.8 170 44.7
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 6.1e-36 154.8 170 46.5
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 8.0e-36 154.5 170 45.9
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 1.0e-35 154.1 179 44.7
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 1.8e-35 153.3 170 47.6
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.8e-35 153.3 171 46.2
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 4.0e-35 152.1 183 48.1
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 4.0e-35 152.1 171 46.8
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 1.5e-34 150.2 181 45.3
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.5e-34 150.2 119 58.8
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.6e-34 149.4 170 47.1
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 2.6e-34 149.4 170 44.7
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 3.4e-34 149.1 178 44.4
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 4.4e-34 148.7 179 43.6
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 7.5e-34 147.9 179 41.9
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 9.8e-34 147.5 179 41.9
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 9.8e-34 147.5 179 43.0
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 9.8e-34 147.5 179 41.9
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 1.3e-33 147.1 182 45.1
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 1.3e-33 147.1 182 45.1
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.7e-33 146.7 181 44.8
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.7e-33 146.7 176 43.2
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.7e-33 146.7 189 47.6
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 8.3e-33 144.4 175 45.1
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 8.3e-33 144.4 182 45.1
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 8.3e-33 144.4 182 45.1
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 1.1e-32 144.1 174 43.7
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 1.4e-32 143.7 180 42.2
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 4.1e-32 142.1 170 44.1
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 3.5e-31 139.0 179 40.8
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 7.8e-31 137.9 177 43.5
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 7.8e-31 137.9 176 44.3
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 1.3e-30 137.1 190 45.8
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.9e-30 135.6 177 44.1
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.1e-29 134.0 175 44.0
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 4.3e-29 132.1 179 43.6
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 7.3e-29 131.3 189 41.8
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.2e-28 130.6 172 44.8
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 2.1e-28 129.8 182 44.0
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 3.1e-27 125.9 175 41.1
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 8.3e-25 117.9 111 51.4
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 1.1e-24 117.5 171 40.4
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 3.3e-21 105.9 114 50.9
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 5.2e-19 98.6 179 38.5
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 5.1e-14 82.0 186 28.5
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 9.9e-10 67.8 170 29.4
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 4.9e-09 65.5 182 28.0
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 2.4e-08 63.2 108 36.1


User provided reference genes

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