Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 5.6e-140 502.7 255 100.0
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 8.1e-123 445.7 250 91.6
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 7.7e-81 306.2 244 63.9
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 1.1e-71 275.8 250 57.2
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 1.5e-71 275.4 250 58.8
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 2.5e-71 274.6 248 56.9
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 3.6e-70 270.8 250 57.2
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 3.0e-69 267.7 250 58.4
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 3.7e-67 260.8 256 57.0
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 4.8e-67 260.4 249 56.6
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.1e-66 259.2 248 54.8
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 5.3e-66 256.9 248 57.7
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 5.3e-66 256.9 260 55.0
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 1.6e-65 255.4 198 63.6
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 2.0e-65 255.0 249 57.0
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 2.7e-65 254.6 247 54.7
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 6.5e-64 250.0 252 57.1
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 5.2e-61 240.4 247 51.8
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.2e-60 239.2 251 52.2
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 1.5e-60 238.8 250 50.0
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 2.6e-60 238.0 223 55.6
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 7.5e-60 236.5 251 50.6
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 3.3e-55 221.1 249 49.8
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 7.2e-55 219.9 253 50.2
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 1.6e-54 218.8 247 48.6
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 3.6e-54 217.6 167 66.5
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 6.1e-54 216.9 248 50.4
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 3.0e-53 214.5 253 49.4
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 1.2e-52 212.6 255 47.5
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 7.5e-52 209.9 188 54.8
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 9.8e-52 209.5 250 48.4
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 2.8e-51 208.0 232 48.7
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 3.7e-51 207.6 246 50.0
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 4.9e-51 207.2 217 53.5
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 4.9e-51 207.2 247 48.6
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 4.9e-51 207.2 249 47.8
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 8.3e-51 206.5 191 57.6
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 1.1e-50 206.1 251 47.8
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 1.8e-50 205.3 249 50.6
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 2.4e-50 204.9 247 48.2
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.2e-50 204.5 194 56.7
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 7.0e-50 203.4 250 47.6
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 1.2e-49 202.6 253 46.2
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 1.2e-49 202.6 253 47.0
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 1.6e-49 202.2 253 46.2
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 3.5e-49 201.1 253 47.0
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 3.5e-49 201.1 250 47.6
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 4.5e-49 200.7 252 46.0
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 1.3e-48 199.1 253 46.6
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 2.9e-48 198.0 246 48.0
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 6.6e-48 196.8 248 46.8
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 2.8e-46 191.4 263 44.9
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 1.2e-44 186.0 256 44.5
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 1.3e-43 182.6 239 46.4
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 1.7e-43 182.2 256 42.6
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 2.2e-43 181.8 267 41.9
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 6.4e-43 180.3 258 43.4
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 1.1e-42 179.5 195 49.7
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 9.2e-42 176.4 254 43.3
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 2.7e-41 174.9 253 41.9
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 6.0e-41 173.7 255 42.0
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 6.0e-41 173.7 254 42.5
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 7.8e-41 173.3 258 43.8
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 1.3e-40 172.6 178 50.0
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 1.3e-40 172.6 255 43.9
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 1.7e-40 172.2 263 41.8
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 2.3e-40 171.8 274 44.2
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 5.0e-40 170.6 239 44.8
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 5.0e-40 170.6 256 41.0
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 8.6e-40 169.9 257 42.0
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-39 169.5 267 41.2
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-39 169.5 267 41.2
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 1.5e-39 169.1 204 47.5
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 1.9e-39 168.7 215 45.1
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 5.6e-39 167.2 256 41.0
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 1.8e-37 162.2 246 43.1
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 1.7e-35 155.6 256 40.2
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 2.9e-35 154.8 250 40.4
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 1.9e-34 152.1 192 42.2
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 5.4e-34 150.6 171 45.6
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 8.6e-32 143.3 247 36.0
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 5.6e-31 140.6 253 36.0
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 3.4e-28 131.3 252 36.5
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 1.7e-24 119.0 91 62.6
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 5.1e-24 117.5 91 62.6
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 2.1e-22 112.1 81 67.9
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 4.4e-20 104.4 158 39.2
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 2.9e-19 101.7 158 38.0
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.8e-19 101.3 191 33.0
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 8.7e-16 90.1 107 49.5
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 1.5e-15 89.4 79 58.2
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 4.3e-15 87.8 220 32.7
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 2.6e-12 78.6 95 48.4
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 5.8e-12 77.4 88 48.9
FvH4_2g40380 Fragaria vesca HOM05D007639 ORTHO05D009509 1.9e-07 62.4 183 30.6
vmacro04826 Vaccinium macrocarpon HOM05D007639 ORTHO05D009509 4.3e-07 61.2 150 30.0
vmacro04988 Vaccinium macrocarpon HOM05D007639 ORTHO05D009509 4.3e-07 61.2 150 30.0
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 5.6e-07 60.8 155 29.7
RcHm_v2.0_Chr6g0300361 Rosa chinensis HOM05D007639 ORTHO05D009509 9.6e-07 60.1 183 29.5
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 2.1e-06 58.9 152 30.3
ATR0733G078 Amborella trichopoda HOM05D007639 ORTHO05D009509 6.2e-06 57.4 216 27.8
TWI60G0667 Tripterygium wilfordii HOM05D007639 ORTHO05D009509 6.2e-06 57.4 196 28.6


User provided reference genes

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