Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 0.0e+00 1110.1 548 100.0
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 1.2e-295 1019.2 548 91.6
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 2.2e-206 722.6 532 68.0
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.7e-193 679.9 553 63.7
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 2.2e-193 679.5 565 62.3
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 6.3e-193 677.9 553 63.5
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 8.0e-188 661.0 544 64.0
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.0e-187 660.6 532 62.0
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 2.3e-187 659.4 545 62.2
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 4.0e-187 658.7 539 63.6
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 7.5e-186 654.4 552 61.8
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.3e-185 653.7 561 59.0
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 1.3e-185 653.7 535 62.2
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 1.3e-185 653.7 519 61.8
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 3.1e-184 649.0 540 62.4
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 2.0e-183 646.4 549 61.7
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 7.7e-183 644.4 465 67.1
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.7e-182 643.3 562 60.0
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 3.8e-182 642.1 550 58.9
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 1.6e-180 636.7 542 60.1
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 4.7e-180 635.2 539 59.9
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 8.0e-180 634.4 421 71.7
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 2.6e-178 629.4 494 61.9
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 4.4e-178 628.6 556 58.1
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.7e-177 626.7 494 61.9
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 6.3e-177 624.8 551 60.4
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.4e-176 622.9 493 61.5
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 3.5e-175 619.0 546 57.7
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.9e-174 615.9 541 59.3
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 1.1e-173 614.0 473 63.6
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.5e-173 613.6 428 69.2
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 4.3e-173 612.1 538 57.4
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 7.3e-173 611.3 473 62.8
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 2.8e-172 609.4 530 58.5
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.0e-171 607.4 442 67.4
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.4e-171 607.1 558 57.5
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 8.9e-171 604.4 478 63.4
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 1.2e-170 604.0 476 63.4
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.0e-170 603.2 451 65.0
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 2.6e-170 602.8 518 56.8
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.7e-169 600.1 471 62.6
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 2.2e-169 599.7 513 57.5
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 3.7e-169 599.0 514 58.0
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 8.3e-169 597.8 508 57.9
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 7.8e-167 591.3 406 68.0
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.0e-166 590.9 419 66.3
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 1.0e-166 590.9 539 54.7
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 2.3e-166 589.7 476 60.3
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 8.1e-164 581.3 476 59.7
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 8.9e-163 577.8 391 69.6
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.3e-161 573.9 476 59.5
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 2.2e-161 573.2 500 57.0
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 4.9e-161 572.0 538 56.9
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.1e-160 570.9 518 56.2
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.9e-160 570.1 486 58.8
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 4.1e-160 568.9 518 57.1
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 4.1e-160 568.9 494 57.9
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 5.4e-160 568.5 520 56.2
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 7.1e-160 568.2 478 57.9
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 9.2e-160 567.8 515 59.0
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.2e-159 567.4 423 62.4
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.1e-159 566.6 544 54.4
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 2.7e-159 566.2 424 62.0
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 7.8e-159 564.7 518 55.8
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 1.0e-158 564.3 548 53.6
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 6.6e-158 561.6 462 59.7
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 9.5e-157 557.8 487 57.7
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 9.5e-157 557.8 530 53.2
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 1.2e-156 557.4 519 54.5
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.8e-156 556.2 530 52.6
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 4.7e-156 555.4 473 56.9
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 4.0e-155 552.4 543 52.5
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 5.2e-155 552.0 430 61.9
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 6.8e-155 551.6 391 63.7
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.9e-153 546.2 547 52.1
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 3.7e-153 545.8 473 56.0
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.4e-152 543.9 478 57.7
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 5.4e-152 542.0 499 54.9
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 5.1e-150 535.4 526 52.3
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 7.6e-146 521.5 583 51.1
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 2.4e-136 490.0 475 52.4
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 1.1e-131 474.6 362 58.8
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.2e-128 463.0 292 74.7
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 1.0e-126 458.0 289 73.0
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 2.5e-125 453.4 291 71.5
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 1.8e-118 430.6 385 51.7
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 2.1e-116 423.7 425 47.5
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.4e-115 421.0 379 51.7
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 3.1e-115 419.9 286 68.9
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 6.9e-115 418.7 452 43.8
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 6.9e-115 418.7 555 45.2
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 1.4e-112 411.0 294 66.0
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.2e-108 397.1 280 65.7
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.9e-104 384.0 563 42.5
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.1e-99 366.3 261 71.3
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 1.4e-94 351.3 225 70.2
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.4e-93 346.3 479 42.4
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 5.7e-93 345.9 234 69.2
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 9.7e-93 345.1 371 45.3
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 8.2e-92 342.0 228 69.7
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.4e-91 341.3 389 42.7
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.8e-89 333.2 246 69.9
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.3e-68 265.0 264 53.8
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 1.8e-67 261.2 547 32.9
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.0e-65 255.4 167 71.9
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.1e-59 235.3 331 37.8
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 2.0e-53 214.5 270 50.4
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 2.2e-52 211.1 249 51.0
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.1e-46 192.2 293 34.5
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 2.9e-44 184.1 261 42.9
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 1.1e-43 182.2 222 47.7
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 5.6e-40 169.9 103 77.7
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 5.2e-38 163.3 244 41.8
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 4.4e-37 160.2 422 30.3
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 2.3e-33 147.9 273 31.5
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 6.6e-33 146.4 107 66.4
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 9.3e-27 125.9 91 67.0
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.5e-24 118.6 122 45.1
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 2.5e-24 117.9 213 36.2
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 9.0e-22 109.4 98 54.1
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 7.9e-18 96.3 73 69.9
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.1e-16 92.4 63 65.1
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 7.1e-11 73.2 35 80.0
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-08 65.9 47 61.7


User provided reference genes

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